HHsearch alignment for GI: 254780332 and conserved domain: PRK11248

Probab=97.26  E-value=0.0034  Score=43.74  Aligned_cols=177  Identities=18%  Similarity=0.152  Sum_probs=85.3

Q ss_pred             HHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC--CEEEEEE----CCCCHHHHHHH
Q ss_conf             13776556416772677621310027699999999998510111233333212479--7589995----85217999878
Q gi|254780332|r  207 QTLDKQMGGLQRSDLIIIAGRPGMGKTSLATNIAYNVADAYKAELQTDGSYKTING--GIVGFYS----LEMSSEQLATR  280 (504)
Q Consensus       207 ~~LD~~~gGl~~G~l~Viaarpg~GKTalalniA~~~A~~~~~~~~~~~~~~~~~g--~~Vl~fS----lEMs~~el~~R  280 (504)
T Consensus        15 ~~L~dvsl~i~~Ge~~~lvGpnGaGKSTLl~~i-~Gl~~p~~G~I~~~G~~i~~~~~~~g~vfQ~~~l~p~~tv~-----   88 (255)
T PRK11248         15 PALEDINLTLESGELLVVLGPSGCGKTTLLNLI-AGFVPPQHGSITLDGKPVEGPGAERGVVFQNEGLLPWRNVQ-----   88 (255)
T ss_pred             EEEECEEEEECCCCEEEEECCCCCHHHHHHHHH-HCCCCCCCCEEEECCCCCCCCCHHCEEEECCCCCCCCCCHH-----
T ss_conf             888131779869989999999984699999999-75998899718579964788621106994557547568799-----


Q ss_pred             HHHHHHHHCCCCCCCCCCCHHH-HHHHHHHHHHHHHCCEE--EECCC-CCCHH--HHHHHHHHHCCCCCCCEEEECCHHH
Q ss_conf             9999874101100012137688-99899999998627807--82589-98899--9999886402244474677671353
Q gi|254780332|r  281 IISEQTEVPSSKIRRGELTRPD-YEKIVACSQVMQKLPLY--IDQTG-GISMS--QLATRARRLKRQRGLDLLIVDYIQL  354 (504)
Q Consensus       281 ~is~~s~I~~~~i~~g~l~~~e-~~~i~~a~~~l~~~~l~--I~d~~-~~ti~--~I~~~~r~~~~~~gi~~vvIDYLql  354 (504)
T Consensus        89 -----env~~~l~~~g-~~~~~~~~~~~~~L~~v---gL~~~~~~~p~~LSGGqkQRVaiArAL~--~~P~iLllD----  153 (255)
T PRK11248         89 -----DNVAFGLQLAG-VEKMQRLEIAHQMLKKV---GLEGAEKRYIWQLSGGQRQRVGIARALA--ANPQLLLLD----  153 (255)
T ss_pred             -----HHHHHHHHHCC-CCHHHHHHHHHHHHHHC---CCHHHHCCCHHHCCHHHHHHHHHHHHHH--CCCCEEEEE----
T ss_conf             -----99998998748-98789999999999976---9902441893349999999999999997--299999980----


Q ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHCCEEEEEE
Q ss_conf             2566443211378899999999999988279199977138220168999984010143242233138788972
Q gi|254780332|r  355 MTTSKKIEENRVLEITGITMALKALAKELNIPIIALSQLSRQVENRDNKRPQLSDLRESGSIEQDADVVLFVI  427 (504)
Q Consensus       355 i~~~~~~~~~r~~~i~~is~~lK~lA~e~~ipvi~lsQLnR~~e~r~~krP~lsDLr~Sg~IEqdAD~v~~l~  427 (504)
T Consensus       154 -EPt~~-LD--~~~r~~l~~ll~~l~~~~g~Til~vTH----------------dl---~ea~~ladrv~vm~  203 (255)
T PRK11248        154 -EPFGA-LD--AFTREQMQELLLKLWQETGKQVLLITH----------------DI---EEAVFMATELVLLS  203 (255)
T ss_pred             -CCCCC-CC--HHHHHHHHHHHHHHHHHCCCEEEEECC----------------CH---HHHHHHCCEEEEEE
T ss_conf             -88777-99--899999999999999961999999886----------------89---99999699999982