HHsearch alignment for GI: 254780332 and conserved domain: PRK11614
>PRK11614 livF leucine/isoleucine/valine transporter ATP-binding subunit; Provisional.
Probab=96.85 E-value=0.028 Score=36.77 Aligned_cols=178 Identities=19% Similarity=0.257 Sum_probs=86.9
Q ss_pred CHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCC---HHHHHHHHH
Q ss_conf 01377655641677267762131002769999999999851011123333321247975899958521---799987899
Q gi|254780332|r 206 IQTLDKQMGGLQRSDLIIIAGRPGMGKTSLATNIAYNVADAYKAELQTDGSYKTINGGIVGFYSLEMS---SEQLATRII 282 (504)
Q Consensus 206 ~~~LD~~~gGl~~G~l~Viaarpg~GKTalalniA~~~A~~~~~~~~~~~~~~~~~g~~Vl~fSlEMs---~~el~~R~i 282 (504)
T Consensus 18 ~~~L~~isl~i~~Gei~~liG~NGaGKSTLl~~i~G-~~~--------------~~~G~I~~~G~~i~~~~~~~~~r~~i 82 (237)
T PRK11614 18 IQALHEVSLHINQGEIVTLIGANGAGKTTLLGTLCG-DPR--------------ATSGRIVFDGKDITDWQTAKIMREAV 82 (237)
T ss_pred EEEEEEEEEEECCCCEEEEECCCCCCHHHHHHHHHC-CCC--------------CCCEEEEECCEECCCCCHHHHHHHCE
T ss_conf 888811278986997999987999759999999967-998--------------89628999999888799899987064
Q ss_pred HHHHH---H-C---C-CCCCCC-CC-CHHHH-HHHHHHHHHHHHCCEEEEC-CCCCCHHHH--HHHHHHHCCCCCCCEEE
Q ss_conf 99874---1-0---1-100012-13-76889-9899999998627807825-899889999--99886402244474677
Q gi|254780332|r 283 SEQTE---V-P---S-SKIRRG-EL-TRPDY-EKIVACSQVMQKLPLYIDQ-TGGISMSQL--ATRARRLKRQRGLDLLI 348 (504)
Q Consensus 283 s~~s~---I-~---~-~~i~~g-~l-~~~e~-~~i~~a~~~l~~~~l~I~d-~~~~ti~~I--~~~~r~~~~~~gi~~vv 348 (504)
T Consensus 83 ~~vpq~~~~~~~ltv~enl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~LSgG~~Qrv~iAraL~--~~P~lLl 160 (237)
T PRK11614 83 AIVPEGRRVFSRMTVEENLAMGGFFAERDQFQERIKWVYELFPRLHERRIQRAGTMSGGEQQMLAIGRALM--SQPRLLL 160 (237)
T ss_pred EEECCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH--CCCCEEE
T ss_conf 78355664577788999987510137867899999999986555567654422348998859999999985--6999999
Q ss_pred ECCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHCCEEEEEEC
Q ss_conf 67135325664432113788999999999999882791999771382201689999840101432422331387889725
Q gi|254780332|r 349 VDYIQLMTTSKKIEENRVLEITGITMALKALAKELNIPIIALSQLSRQVENRDNKRPQLSDLRESGSIEQDADVVLFVIR 428 (504)
Q Consensus 349 IDYLqli~~~~~~~~~r~~~i~~is~~lK~lA~e~~ipvi~lsQLnR~~e~r~~krP~lsDLr~Sg~IEqdAD~v~~l~R 428 (504)
T Consensus 161 LD-----EPt~gL-D--~~~~~~i~~~l~~l~~~-g~tii~vsH-------------------~l~~~~~~aDrv~vl~~ 212 (237)
T PRK11614 161 LD-----EPSLGL-A--PIIIQQIFDTIEQLREQ-GMTIFLVEQ-------------------NANQALKLADRGYVLEN 212 (237)
T ss_pred EE-----CCCCCC-C--HHHHHHHHHHHHHHHHC-CCEEEEEEC-------------------CHHHHHHHCCEEEEEEC
T ss_conf 95-----975579-9--99999999999999967-999999947-------------------58999996999999979