HHsearch alignment for GI: 254780332 and conserved domain: PRK11629
>PRK11629 lolD lipoprotein transporter ATP-binding subunit; Provisional.
Probab=97.36 E-value=0.0039 Score=43.34 Aligned_cols=156 Identities=16% Similarity=0.207 Sum_probs=78.2
Q ss_pred HHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECC---CCHHHHHH---HH
Q ss_conf 3776556416772677621310027699999999998510111233333212479758999585---21799987---89
Q gi|254780332|r 208 TLDKQMGGLQRSDLIIIAGRPGMGKTSLATNIAYNVADAYKAELQTDGSYKTINGGIVGFYSLE---MSSEQLAT---RI 281 (504)
Q Consensus 208 ~LD~~~gGl~~G~l~Viaarpg~GKTalalniA~~~A~~~~~~~~~~~~~~~~~g~~Vl~fSlE---Ms~~el~~---R~ 281 (504)
T Consensus 24 ~l~~vs~~i~~GE~v~iiG~sGsGKSTLl~~i~-Gl~~p--------------~~G~I~~~g~~i~~~~~~~~~~~r~~~ 88 (233)
T PRK11629 24 VLHNVSFSIGEGEMMAIVGSSGSGKSTLLHLLG-GLDTP--------------TSGDVIFNGQPMSKLSSAAKAELRNQK 88 (233)
T ss_pred EEECEEEEECCCCEEEEECCCCCCHHHHHHHHH-CCCCC--------------CCEEEEECCEECCCCCHHHHHHHHCCC
T ss_conf 984628998899899999999940999999996-69999--------------863999999998869988999873797
Q ss_pred HHHH-------------HHHCCCCCCCCCCCHHH-HHHHHHHHHHHHHCCEE--EECCC-CCCHHH--HHHHHHHHCCCC
Q ss_conf 9998-------------74101100012137688-99899999998627807--82589-988999--999886402244
Q gi|254780332|r 282 ISEQ-------------TEVPSSKIRRGELTRPD-YEKIVACSQVMQKLPLY--IDQTG-GISMSQ--LATRARRLKRQR 342 (504)
Q Consensus 282 is~~-------------s~I~~~~i~~g~l~~~e-~~~i~~a~~~l~~~~l~--I~d~~-~~ti~~--I~~~~r~~~~~~ 342 (504)
T Consensus 89 ig~v~Q~~~l~~~~tv~eni~~~l~-~~~~~~~~~~~~~~~~l~~~---gl~~~~~~~~~~LSGGqkQRvaiAraL~--~ 162 (233)
T PRK11629 89 LGFIYQFHHLLPDFTALENVAMPLL-IGKKKPAEINSRALEMLKAV---GLEHRANHRPSELSGGERQRVAIARALV--N 162 (233)
T ss_pred EEEECCCCCCCCCCCHHHHHHHHHH-HCCCCHHHHHHHHHHHHHHC---CCHHHHHCCCCEECHHHHHHHHHHHHHH--C
T ss_conf 8999167523778669999988999-84999999999899999872---7366774984663899999999999996--5
Q ss_pred CCCEEEECCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEE
Q ss_conf 47467767135325664432113788999999999999882791999771
Q gi|254780332|r 343 GLDLLIVDYIQLMTTSKKIEENRVLEITGITMALKALAKELNIPIIALSQ 392 (504)
Q Consensus 343 gi~~vvIDYLqli~~~~~~~~~r~~~i~~is~~lK~lA~e~~ipvi~lsQ 392 (504)
T Consensus 163 ~P~illlD-----EPTs~-LD~--~~~~~i~~~l~~l~~~~g~tvi~vtH 204 (233)
T PRK11629 163 NPRLVLAD-----EPTGN-LDA--RNADSIFQLLGELNRLQGTAFLVVTH 204 (233)
T ss_pred CCCEEEEE-----CCCCC-CCH--HHHHHHHHHHHHHHHHCCCEEEEECC
T ss_conf 99999992-----88887-999--99999999999999970989999868