HHsearch alignment for GI: 254780332 and conserved domain: PRK11831
>PRK11831 putative ABC transporter ATP-binding protein YrbF; Provisional.
Probab=96.98 E-value=0.0053 Score=42.31 Aligned_cols=175 Identities=19% Similarity=0.208 Sum_probs=89.3
Q ss_pred HHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEC---CCCHHHHH--HHH
Q ss_conf 1377655641677267762131002769999999999851011123333321247975899958---52179998--789
Q gi|254780332|r 207 QTLDKQMGGLQRSDLIIIAGRPGMGKTSLATNIAYNVADAYKAELQTDGSYKTINGGIVGFYSL---EMSSEQLA--TRI 281 (504)
Q Consensus 207 ~~LD~~~gGl~~G~l~Viaarpg~GKTalalniA~~~A~~~~~~~~~~~~~~~~~g~~Vl~fSl---EMs~~el~--~R~ 281 (504)
T Consensus 22 ~vL~~is~~i~~Gei~~iiGpnGsGKSTLlk~i~G-l~~p--------------~~G~I~~~G~~i~~~~~~~~~~~r~~ 86 (269)
T PRK11831 22 CIFDNISLTVPRGKITAIMGPSGIGKTTLLRLIGG-QIAP--------------DHGEILFDGENIPAMSRSRLYTVRKR 86 (269)
T ss_pred EEEECCEEEECCCCEEEEECCCCCHHHHHHHHHHC-CCCC--------------CCCEEEECCEECCCCCHHHHHHHHHC
T ss_conf 99947166887998999993999759999999967-9888--------------98669999988876588789987614
Q ss_pred HHHHH-------------HHCCCCCCCCCCCHHHH-HHHHHHHHHHHHCCEE--EEC-CCCCCHHH--HHHHHHHHCCCC
Q ss_conf 99987-------------41011000121376889-9899999998627807--825-89988999--999886402244
Q gi|254780332|r 282 ISEQT-------------EVPSSKIRRGELTRPDY-EKIVACSQVMQKLPLY--IDQ-TGGISMSQ--LATRARRLKRQR 342 (504)
Q Consensus 282 is~~s-------------~I~~~~i~~g~l~~~e~-~~i~~a~~~l~~~~l~--I~d-~~~~ti~~--I~~~~r~~~~~~ 342 (504)
T Consensus 87 i~~v~Q~~~l~~~ltv~eni~~~l~~~~~~~~~~~~~~v~~~Le~---~gL~~~~~~~~~~LSGGq~QRv~iAraL~--~ 161 (269)
T PRK11831 87 MSMLFQSGALFTDMNVFDNVAYPLREHTQLPAPLLHSTVMMKLEA---VGLRGAAKLMPSELSGGMARRAALARAIA--L 161 (269)
T ss_pred EEEECCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH---CCCHHHHHCCCCCCCHHHHHHHHHHHHHH--C
T ss_conf 689853763267885999998999995589999999999999986---17654563882318999999999999997--5
Q ss_pred CCCEEEECCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHCCE
Q ss_conf 47467767135325664432113788999999999999882791999771382201689999840101432422331387
Q gi|254780332|r 343 GLDLLIVDYIQLMTTSKKIEENRVLEITGITMALKALAKELNIPIIALSQLSRQVENRDNKRPQLSDLRESGSIEQDADV 422 (504)
Q Consensus 343 gi~~vvIDYLqli~~~~~~~~~r~~~i~~is~~lK~lA~e~~ipvi~lsQLnR~~e~r~~krP~lsDLr~Sg~IEqdAD~ 422 (504)
T Consensus 162 ~P~iLlLD-----EPtsg-LD--~~~~~~i~~li~~l~~~~g~TiiivtH----------------dl---~~v~~iaDr 214 (269)
T PRK11831 162 EPDLIMFD-----EPFVG-QD--PITMGVLVKLISELNSALGVTCVVVSH----------------DV---PEVLSIADH 214 (269)
T ss_pred CCCEEEEC-----CCCCC-CC--HHHHHHHHHHHHHHHHHCCCEEEEECC----------------CH---HHHHHHCCE
T ss_conf 99999982-----87567-99--999999999999999852989999864----------------98---999986999
Q ss_pred EEEEEC
Q ss_conf 889725
Q gi|254780332|r 423 VLFVIR 428 (504)
Q Consensus 423 v~~l~R 428 (504)
T Consensus 215 v~vl~~ 220 (269)
T PRK11831 215 AWIVAD 220 (269)
T ss_pred EEEEEC
T ss_conf 999989