HHsearch alignment for GI: 254780332 and conserved domain: PRK11889

Probab=97.35  E-value=0.0071  Score=41.36  Aligned_cols=86  Identities=17%  Similarity=0.314  Sum_probs=56.9

Q ss_pred             CEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCC
Q ss_conf             26776213100276999999999985101112333332124797589995852179998789999874101100012137
Q gi|254780332|r  220 DLIIIAGRPGMGKTSLATNIAYNVADAYKAELQTDGSYKTINGGIVGFYSLEMSSEQLATRIISEQTEVPSSKIRRGELT  299 (504)
Q Consensus       220 ~l~Viaarpg~GKTalalniA~~~A~~~~~~~~~~~~~~~~~g~~Vl~fSlEMs~~el~~R~is~~s~I~~~~i~~g~l~  299 (504)
T Consensus       242 q~IALVGPTGVGKTTTIAKLAArf~---------------~~~KkVALITtD------TYRIGA----------------  284 (436)
T PRK11889        242 QTIALIGPTGVGKTTTLAKMAWQFH---------------GKKKTVGFITTD------HSRIGT----------------  284 (436)
T ss_pred             EEEEEECCCCCCHHHHHHHHHHHHH---------------CCCCEEEEEECC------CCHHHH----------------
T ss_conf             1799989999888999999999986---------------169808999806------634769----------------


Q ss_pred             HHHHHHHHHHHHHHHHCCEEEECCCCCCHHHHHHHHHHHCCCCCCCEEEEC
Q ss_conf             688998999999986278078258998899999988640224447467767
Q gi|254780332|r  300 RPDYEKIVACSQVMQKLPLYIDQTGGISMSQLATRARRLKRQRGLDLLIVD  350 (504)
Q Consensus       300 ~~e~~~i~~a~~~l~~~~l~I~d~~~~ti~~I~~~~r~~~~~~gi~~vvID  350 (504)
T Consensus       285 ---VEQLKTYA-eIMgVPV~VV~----dp~eL~~AL~~lkdka~~DLILID  327 (436)
T PRK11889        285 ---VQQLQDYV-KTIGFEVIAVR----DEAAMTRALTYFKEEARVDYILID  327 (436)
T ss_pred             ---HHHHHHHH-HHHCCCEEEEC----CHHHHHHHHHHHHHCCCCCEEEEE
T ss_conf             ---99999999-98499439968----889999999987633688889992