HHsearch alignment for GI: 254780332 and conserved domain: PRK12597
>PRK12597 F0F1 ATP synthase subunit beta; Provisional.
Probab=94.21 E-value=0.042 Score=35.44 Aligned_cols=44 Identities=25% Similarity=0.463 Sum_probs=34.1
Q ss_pred CCCCCHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHH
Q ss_conf 432101377655641677267762131002769999999999851
Q gi|254780332|r 202 VSTGIQTLDKQMGGLQRSDLIIIAGRPGMGKTSLATNIAYNVADA 246 (504)
Q Consensus 202 i~TG~~~LD~~~gGl~~G~l~Viaarpg~GKTalalniA~~~A~~ 246 (504)
T Consensus 125 l~TGIkaID~l~p-igrGqrigIfggaGvGKTvL~~~ii~n~~~~ 168 (459)
T PRK12597 125 LETGIKVIDLLCP-IAKGGKTGLFGGAGVGKTVLMMELIFNISKR 168 (459)
T ss_pred CCCCHHHHHCCCC-CCCCCEEEEECCCCCCCCHHHHHHHHHHHHH
T ss_conf 0038055541266-3578777743689998215789999987755