HHsearch alignment for GI: 254780332 and conserved domain: PRK12723
>PRK12723 flagellar biosynthesis regulator FlhF; Provisional.
Probab=97.43 E-value=0.006 Score=41.93 Aligned_cols=42 Identities=17% Similarity=0.249 Sum_probs=32.1
Q ss_pred CCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECC
Q ss_conf 72677621310027699999999998510111233333212479758999585
Q gi|254780332|r 219 SDLIIIAGRPGMGKTSLATNIAYNVADAYKAELQTDGSYKTINGGIVGFYSLE 271 (504)
Q Consensus 219 G~l~Viaarpg~GKTalalniA~~~A~~~~~~~~~~~~~~~~~g~~Vl~fSlE 271 (504)
T Consensus 174 ~~vi~lVGPTGvGKTTTiAKLAa~~~l~~~-----------~k~~~V~lit~D 215 (388)
T PRK12723 174 KRIFILVGPTGVGKTTTIAKLAAIYGINSD-----------DKSLNIKIITID 215 (388)
T ss_pred CEEEEEECCCCCCHHHHHHHHHHHHHHHCC-----------CCCCCEEEEEEC
T ss_conf 628999899887578799999999998626-----------767737999807