HHsearch alignment for GI: 254780332 and conserved domain: PRK13341

>PRK13341 recombination factor protein RarA/unknown domain fusion protein; Reviewed.
Probab=93.78  E-value=0.27  Score=29.35  Aligned_cols=61  Identities=8%  Similarity=0.046  Sum_probs=24.8

Q ss_pred             CCCHHHHHHHHHCCCCHHHCCHHH-H--HHHHHHHH---HHHHHHHHHHHHHH----HHHHHHHHHHHHHH
Q ss_conf             868643888973179832359489-9--99999622---11222367787878----99999999987655
Q gi|254780332|r   77 TANPVTVKTFLSDQDMLGELTVPQ-Y--LARLASEA---VSIINTEDYGRIIY----GLALRRTLITIGEE  137 (504)
Q Consensus        77 ~iD~itl~~~L~~~~~l~~igg~~-y--L~~L~~~~---~s~~n~~~ya~~Ik----e~~~~R~li~~~~~  137 (504)
T Consensus       234 ~i~~~~~~~~~~~~~~~YDk~GD~HYd~iSAfiKSiRGSDpDAALywLARMLeaGEDP~fIaRRLii~AsE  304 (726)
T PRK13341        234 HINLAIAEESIQQRAVLYDKEGDAHFDTISAFIKSLRGSDPDAALYWLARMVEAGEDPRFIFRRMLIAASE  304 (726)
T ss_pred             EECHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
T ss_conf             43599999998566605687751788999999998654896789999999997599889999999999984