HHsearch alignment for GI: 254780332 and conserved domain: PRK13341
>PRK13341 recombination factor protein RarA/unknown domain fusion protein; Reviewed.
Probab=93.78 E-value=0.27 Score=29.35 Aligned_cols=61 Identities=8% Similarity=0.046 Sum_probs=24.8
Q ss_pred CCCHHHHHHHHHCCCCHHHCCHHH-H--HHHHHHHH---HHHHHHHHHHHHHH----HHHHHHHHHHHHHH
Q ss_conf 868643888973179832359489-9--99999622---11222367787878----99999999987655
Q gi|254780332|r 77 TANPVTVKTFLSDQDMLGELTVPQ-Y--LARLASEA---VSIINTEDYGRIIY----GLALRRTLITIGEE 137 (504)
Q Consensus 77 ~iD~itl~~~L~~~~~l~~igg~~-y--L~~L~~~~---~s~~n~~~ya~~Ik----e~~~~R~li~~~~~ 137 (504)
T Consensus 234 ~i~~~~~~~~~~~~~~~YDk~GD~HYd~iSAfiKSiRGSDpDAALywLARMLeaGEDP~fIaRRLii~AsE 304 (726)
T PRK13341 234 HINLAIAEESIQQRAVLYDKEGDAHFDTISAFIKSLRGSDPDAALYWLARMVEAGEDPRFIFRRMLIAASE 304 (726)
T ss_pred EECHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
T ss_conf 43599999998566605687751788999999998654896789999999997599889999999999984