HHsearch alignment for GI: 254780332 and conserved domain: PRK13540
>PRK13540 cytochrome c biogenesis protein CcmA; Provisional.
Probab=96.48 E-value=0.046 Score=35.15 Aligned_cols=33 Identities=33% Similarity=0.379 Sum_probs=24.8
Q ss_pred HHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHH
Q ss_conf 377655641677267762131002769999999
Q gi|254780332|r 208 TLDKQMGGLQRSDLIIIAGRPGMGKTSLATNIA 240 (504)
Q Consensus 208 ~LD~~~gGl~~G~l~Viaarpg~GKTalalniA 240 (504)
T Consensus 16 vl~~is~~i~~G~i~~l~G~NGaGKSTLlkli~ 48 (200)
T PRK13540 16 LLQQISFHLPAGGLLHLKGSNGAGKTTLLKLIA 48 (200)
T ss_pred EEECEEEEECCCCEEEEECCCCCCHHHHHHHHH
T ss_conf 881227898799799998899987999999997