HHsearch alignment for GI: 254780332 and conserved domain: PRK13542

>PRK13542 consensus.
Probab=96.03  E-value=0.12  Score=31.91  Aligned_cols=165  Identities=15%  Similarity=0.073  Sum_probs=71.8

Q ss_pred             HHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC----CCCCEEEEE------ECCCCHHHHH
Q ss_conf             776556416772677621310027699999999998510111233333212----479758999------5852179998
Q gi|254780332|r  209 LDKQMGGLQRSDLIIIAGRPGMGKTSLATNIAYNVADAYKAELQTDGSYKT----INGGIVGFY------SLEMSSEQLA  278 (504)
Q Consensus       209 LD~~~gGl~~G~l~Viaarpg~GKTalalniA~~~A~~~~~~~~~~~~~~~----~~g~~Vl~f------SlEMs~~el~  278 (504)
T Consensus        34 l~~isl~i~~Gei~~liGpNGaGKTTLlk~l~Gll-~p~~G~I~~~G~~i~~~~~~~~~~~~~v~~~~~l~~~ltv~enl  112 (224)
T PRK13542         34 FRGIDISLAPGDLLQVMGPNGSGKTSLLRVLSGLM-PPAEGDLYWRGRAVRAGDPDYLQQLAYVGHANGIDPDLSAFENL  112 (224)
T ss_pred             EECCEEEECCCCEEEEECCCCCCHHHHHHHHHCCC-CCCCEEEEECCEECCCCCHHHHHHEEEECCCCCCCCCCCHHHHH
T ss_conf             84616787599799999999999999999995797-88852899999999879988884447866633358787299999


Q ss_pred             HHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCEEEECCCCCCHHHHH--HHHHHHCCCCCCCEEEECCHHHCC
Q ss_conf             789999874101100012137688998999999986278078258998899999--988640224447467767135325
Q gi|254780332|r  279 TRIISEQTEVPSSKIRRGELTRPDYEKIVACSQVMQKLPLYIDQTGGISMSQLA--TRARRLKRQRGLDLLIVDYIQLMT  356 (504)
Q Consensus       279 ~R~is~~s~I~~~~i~~g~l~~~e~~~i~~a~~~l~~~~l~I~d~~~~ti~~I~--~~~r~~~~~~gi~~vvIDYLqli~  356 (504)
T Consensus       113 -~~~~~~~~~~---------~--~~~~~~~~l~~~gl~~~~~~~~~~LSgGqrqRv~lA~al~--~~p~illLD-----E  173 (224)
T PRK13542        113 -RFAARLAGQQ---------A--TADAVHHALARFGLDRVMHAPARTLSQGQRRRVALARLAL--TPRALWLLD-----E  173 (224)
T ss_pred             -HHHHHHCCCC---------C--HHHHHHHHHHHCCCCHHHCCCHHHCCHHHHHHHHHHHHHH--CCCCEEEEC-----C
T ss_conf             -9999873887---------4--6999999999849902546881249999999999999980--799889973-----8


Q ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCC
Q ss_conf             6644321137889999999999998827919997713822
Q gi|254780332|r  357 TSKKIEENRVLEITGITMALKALAKELNIPIIALSQLSRQ  396 (504)
Q Consensus       357 ~~~~~~~~r~~~i~~is~~lK~lA~e~~ipvi~lsQLnR~  396 (504)
T Consensus       174 Ptag-LD--~~~~~~l~~~i~~~~~~g~tvIi~tH~l~~~  210 (224)
T PRK13542        174 PLTS-LD--DASAACFHTLLDEHLRRGGMAVVATHQLLPG  210 (224)
T ss_pred             CCCC-CC--HHHHHHHHHHHHHHHHCCCEEEEEECCCCHH
T ss_conf             5354-89--9999999999999996899899995887488