HHsearch alignment for GI: 254780332 and conserved domain: PRK13546
>PRK13546 teichoic acids export protein ATP-binding subunit; Provisional.
Probab=96.38 E-value=0.035 Score=36.04 Aligned_cols=173 Identities=17% Similarity=0.174 Sum_probs=84.8
Q ss_pred CCHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEC------CCCHHHHH
Q ss_conf 101377655641677267762131002769999999999851011123333321247975899958------52179998
Q gi|254780332|r 205 GIQTLDKQMGGLQRSDLIIIAGRPGMGKTSLATNIAYNVADAYKAELQTDGSYKTINGGIVGFYSL------EMSSEQLA 278 (504)
Q Consensus 205 G~~~LD~~~gGl~~G~l~Viaarpg~GKTalalniA~~~A~~~~~~~~~~~~~~~~~g~~Vl~fSl------EMs~~el~ 278 (504)
T Consensus 36 ~f~AL~dVsf~i~~GEivgllG~NGaGKSTLlk-~I~Gl~~P~~G~I-------~~~G~-i~~~~~~~~l~~~lt~~en- 105 (264)
T PRK13546 36 TFFALDDISLKAYEGDVIGLVGINGSGKSTLSN-IIGGSLSPTVGKV-------DRNGE-VSVIAISAGLSGQLTGIEN- 105 (264)
T ss_pred EEEEECCCEEEECCCCEEEEECCCCCHHHHHHH-HHHCCCCCCCCEE-------EECCE-EEEEEECCCCCCCCEEEHH-
T ss_conf 899952707888599899999899861999999-9967988887479-------99988-7488503565744300015-
Q ss_pred HHHHHHHHHHCCCCCCCCCCCHHHHHH-HHHHHHHHHHCCEEEEC-CCCCCHHHHH--HHHHHHCCCCCCCEEEECCHHH
Q ss_conf 789999874101100012137688998-99999998627807825-8998899999--9886402244474677671353
Q gi|254780332|r 279 TRIISEQTEVPSSKIRRGELTRPDYEK-IVACSQVMQKLPLYIDQ-TGGISMSQLA--TRARRLKRQRGLDLLIVDYIQL 354 (504)
Q Consensus 279 ~R~is~~s~I~~~~i~~g~l~~~e~~~-i~~a~~~l~~~~l~I~d-~~~~ti~~I~--~~~r~~~~~~gi~~vvIDYLql 354 (504)
T Consensus 106 ---------i~~~~~~~g-~~~~~~~~~~~~~le~-~~l~~~~~~~~~~LSgGqkqrl~lA~al~--~~P~iLiLDE--- 169 (264)
T PRK13546 106 ---------IEFKMLCMG-FKRKEIKAMTPKIIEF-SELGEFIYQPVKKYSSGMRAKLGFSINIT--VNPDILVIDE--- 169 (264)
T ss_pred ---------HHHHHHHCC-CCHHHHHHHHHHHHHH-HCCHHHHHCCCCCCCHHHHHHHHHHHHHH--CCCCEEEEEC---
T ss_conf ---------888998724-2499999999999985-12055651755347999999999999995--6999999959---
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHCCEEEEEEC
Q ss_conf 25664432113788999999999999882791999771382201689999840101432422331387889725
Q gi|254780332|r 355 MTTSKKIEENRVLEITGITMALKALAKELNIPIIALSQLSRQVENRDNKRPQLSDLRESGSIEQDADVVLFVIR 428 (504)
Q Consensus 355 i~~~~~~~~~r~~~i~~is~~lK~lA~e~~ipvi~lsQLnR~~e~r~~krP~lsDLr~Sg~IEqdAD~v~~l~R 428 (504)
T Consensus 170 --Pts-~LD~--~~~~~i~~~i~~l~-~~g~TiilvSH~-------------------l~~v~~lcDri~vl~~ 218 (264)
T PRK13546 170 --ALS-VGDQ--TFAQKCLDKIYEFK-EQNKTIFFVSHN-------------------LGQVRQFCTKIAWIEG 218 (264)
T ss_pred --CCC-CCCH--HHHHHHHHHHHHHH-HCCCEEEEECCC-------------------HHHHHHHCCEEEEEEC
T ss_conf --875-4899--99999999999999-689899998487-------------------8999986999999989