HHsearch alignment for GI: 254780332 and conserved domain: PRK13631
>PRK13631 cbiO cobalt transporter ATP-binding subunit; Provisional.
Probab=96.73 E-value=0.033 Score=36.24 Aligned_cols=174 Identities=17% Similarity=0.255 Sum_probs=84.0
Q ss_pred CHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEE----EECCCCHHHH----
Q ss_conf 01377655641677267762131002769999999999851011123333321247975899----9585217999----
Q gi|254780332|r 206 IQTLDKQMGGLQRSDLIIIAGRPGMGKTSLATNIAYNVADAYKAELQTDGSYKTINGGIVGF----YSLEMSSEQL---- 277 (504)
Q Consensus 206 ~~~LD~~~gGl~~G~l~Viaarpg~GKTalalniA~~~A~~~~~~~~~~~~~~~~~g~~Vl~----fSlEMs~~el---- 277 (504)
T Consensus 39 ~~AL~~Is~~i~~Ge~vaIIG~nGsGKSTL~~~l~Gll-~p-------------~~G-~I~i~~~~~~~~~~~~~~~~~~ 103 (320)
T PRK13631 39 LVALNNISYTFEKNKIYFIIGNSGSGKSTLVTHFNGLI-KS-------------KYG-TIQVGDIYIGDKKNNHELITNP 103 (320)
T ss_pred EEEEECCEEEECCCCEEEEECCCCCCHHHHHHHHHCCC-CC-------------CCC-EEEECCEECCCCCCCCCCCCCC
T ss_conf 79861645588599899999499984999999997588-89-------------983-5998658714544563100250
Q ss_pred ----------HHHHHHHHHHHC--------------CCCCCCCCCCHHHH-HHHHHHHHHHHHCCE---EEECCC-CCCH
Q ss_conf ----------878999987410--------------11000121376889-989999999862780---782589-9889
Q gi|254780332|r 278 ----------ATRIISEQTEVP--------------SSKIRRGELTRPDY-EKIVACSQVMQKLPL---YIDQTG-GISM 328 (504)
Q Consensus 278 ----------~~R~is~~s~I~--------------~~~i~~g~l~~~e~-~~i~~a~~~l~~~~l---~I~d~~-~~ti 328 (504)
T Consensus 104 ~~~~~~~~~~lr~~vg~VfQ~P~~~lf~~tV~~di~fg~~~~g-~~~~e~~~r~~~~---L~~vgl~~~~~~r~p~~LSG 179 (320)
T PRK13631 104 YSKKIKNFKELRRRVSMVFQFPEYQLFKDTIEKDIMFGPVALG-VKKSEAKKLAKFY---LNKMGLDDSYLERSPFGLSG 179 (320)
T ss_pred HHHHHHHHHHHHCCEEEEEECCCCCCCHHHHHHHHHHHHHHCC-CCHHHHHHHHHHH---HHHCCCCHHHHHCCCCCCCH
T ss_conf 2667778999753489996074303165289999998899859-9999999999999---98879974674378220999
Q ss_pred HHHH--HHHHHHCCCCCCCEEEECCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCC
Q ss_conf 9999--98864022444746776713532566443211378899999999999988279199977138220168999984
Q gi|254780332|r 329 SQLA--TRARRLKRQRGLDLLIVDYIQLMTTSKKIEENRVLEITGITMALKALAKELNIPIIALSQLSRQVENRDNKRPQ 406 (504)
Q Consensus 329 ~~I~--~~~r~~~~~~gi~~vvIDYLqli~~~~~~~~~r~~~i~~is~~lK~lA~e~~ipvi~lsQLnR~~e~r~~krP~ 406 (504)
T Consensus 180 GqkQRVaIA~aLa--~~P~iLilD-----EPTag-LDp~--~~~~i~~li~~l~~~-g~TiilvTH-------------- 234 (320)
T PRK13631 180 GQKRRVAIAGILA--IQPEILIFD-----EPTAG-LDPK--GEHEMMQLILDAKAN-NKTVFVITH-------------- 234 (320)
T ss_pred HHHHHHHHHHHHH--CCCCEEEEC-----CCCCC-CCHH--HHHHHHHHHHHHHHC-CCEEEEECC--------------
T ss_conf 9999999999972--399999975-----87555-9989--999999999999962-999999947--------------
Q ss_pred CCCCCCCCHHHHHCCEEEEEEC
Q ss_conf 0101432422331387889725
Q gi|254780332|r 407 LSDLRESGSIEQDADVVLFVIR 428 (504)
Q Consensus 407 lsDLr~Sg~IEqdAD~v~~l~R 428 (504)
T Consensus 235 -----dm~~v~~~aDrviVm~~ 251 (320)
T PRK13631 235 -----TMEHVLEVADEVIVMDK 251 (320)
T ss_pred -----CHHHHHHHCCEEEEEEC
T ss_conf -----89999997999999989