HHsearch alignment for GI: 254780332 and conserved domain: PRK13641
>PRK13641 cbiO cobalt transporter ATP-binding subunit; Provisional.
Probab=96.51 E-value=0.047 Score=35.10 Aligned_cols=176 Identities=15% Similarity=0.228 Sum_probs=88.5
Q ss_pred CHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCC----CHHHHH--H
Q ss_conf 0137765564167726776213100276999999999985101112333332124797589995852----179998--7
Q gi|254780332|r 206 IQTLDKQMGGLQRSDLIIIAGRPGMGKTSLATNIAYNVADAYKAELQTDGSYKTINGGIVGFYSLEM----SSEQLA--T 279 (504)
Q Consensus 206 ~~~LD~~~gGl~~G~l~Viaarpg~GKTalalniA~~~A~~~~~~~~~~~~~~~~~g~~Vl~fSlEM----s~~el~--~ 279 (504)
T Consensus 20 ~~aL~~vsl~I~~Ge~~~iiG~nGsGKSTLl~~l~G-ll~P--------------~sG~V~i~G~~i~~~~~~~~~~~~r 84 (286)
T PRK13641 20 KKGLDNISFELEDGSFVALIGHTGSGKSTLMQHFNA-LLKP--------------SSGKITIAGYHITPETSNKNLKDLR 84 (286)
T ss_pred CCEEEEEEEEECCCCEEEEECCCCCHHHHHHHHHHC-CCCC--------------CCEEEEECCEECCCCCCHHHHHHHH
T ss_conf 412431067986999999999998399999999965-9898--------------8549999989997666555799998
Q ss_pred HHHHHHHHHCCCC---------CCCC----CCCHHHHHHHHHHHHHHHHCCEE--EEC-CC-CCCHHHHH--HHHHHHCC
Q ss_conf 8999987410110---------0012----13768899899999998627807--825-89-98899999--98864022
Q gi|254780332|r 280 RIISEQTEVPSSK---------IRRG----ELTRPDYEKIVACSQVMQKLPLY--IDQ-TG-GISMSQLA--TRARRLKR 340 (504)
Q Consensus 280 R~is~~s~I~~~~---------i~~g----~l~~~e~~~i~~a~~~l~~~~l~--I~d-~~-~~ti~~I~--~~~r~~~~ 340 (504)
T Consensus 85 ~~vg~vfQ~p~~ql~~~tV~eev~~g~~~~g~~~~e~--~~~~~~~l~~vgl~~~~~~~~p~~LSGGqkqRvaiA~aLa- 161 (286)
T PRK13641 85 KKVGLVFQFPEAQLFENTVLKDVEFGPKNFGFSEQEA--KEKALKWLKKVGLSEDLISKSPFELSGGQMRRVAIAGVMA- 161 (286)
T ss_pred HHEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCHHHH--HHHHHHHHHHCCCCHHHHHCCHHHCCHHHHHHHHHHHHHH-
T ss_conf 5154897665101261129999999999869998999--9999999997699645554291329999999999999997-
Q ss_pred CCCCCEEEECCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHC
Q ss_conf 44474677671353256644321137889999999999998827919997713822016899998401014324223313
Q gi|254780332|r 341 QRGLDLLIVDYIQLMTTSKKIEENRVLEITGITMALKALAKELNIPIIALSQLSRQVENRDNKRPQLSDLRESGSIEQDA 420 (504)
Q Consensus 341 ~~gi~~vvIDYLqli~~~~~~~~~r~~~i~~is~~lK~lA~e~~ipvi~lsQLnR~~e~r~~krP~lsDLr~Sg~IEqdA 420 (504)
T Consensus 162 -~~P~iLlLD-----EPTsg-LD--p~~~~~i~~ll~~l~~~-G~Tii~vtH----------------d---~~~v~~~a 212 (286)
T PRK13641 162 -YEPEILCLD-----EPAAG-LD--PEGRKEMMQIFKDYQKA-GHTVILVTH----------------N---MDDVAEYA 212 (286)
T ss_pred -CCCCEEEEC-----CCCCC-CC--HHHHHHHHHHHHHHHHC-CCEEEEECC----------------C---HHHHHHHC
T ss_conf -499999973-----97343-89--99999999999999963-999999915----------------9---99999979
Q ss_pred CEEEEEEC
Q ss_conf 87889725
Q gi|254780332|r 421 DVVLFVIR 428 (504)
Q Consensus 421 D~v~~l~R 428 (504)
T Consensus 213 drv~vm~~ 220 (286)
T PRK13641 213 DDVLVLEH 220 (286)
T ss_pred CEEEEEEC
T ss_conf 99999989