HHsearch alignment for GI: 254780332 and conserved domain: PRK13649
>PRK13649 cbiO cobalt transporter ATP-binding subunit; Provisional.
Probab=96.54 E-value=0.0052 Score=42.38 Aligned_cols=173 Identities=14% Similarity=0.179 Sum_probs=86.3
Q ss_pred HHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCH-------HHHHH
Q ss_conf 13776556416772677621310027699999999998510111233333212479758999585217-------99987
Q gi|254780332|r 207 QTLDKQMGGLQRSDLIIIAGRPGMGKTSLATNIAYNVADAYKAELQTDGSYKTINGGIVGFYSLEMSS-------EQLAT 279 (504)
Q Consensus 207 ~~LD~~~gGl~~G~l~Viaarpg~GKTalalniA~~~A~~~~~~~~~~~~~~~~~g~~Vl~fSlEMs~-------~el~~ 279 (504)
T Consensus 21 ~aL~~Vsl~i~~Ge~~aiiG~nGsGKSTLl~~l~G-l~~p--------------~~G~i~~~g~~i~~~~~~~~~~~~~- 84 (280)
T PRK13649 21 RALFDVNLDILDGSYTAFIGHTGSGKSTIMQLLNG-LHVP--------------TTGIVSVDDTDITSHSKNKEIKSIR- 84 (280)
T ss_pred CEEEEEEEEECCCCEEEEECCCCCHHHHHHHHHHC-CCCC--------------CCEEEEECCEECCCCCCHHHHHHHH-
T ss_conf 75410268987998999995999869999999966-9998--------------8608999999987778201399998-
Q ss_pred HHHHHHHHHCCCC---------C----CCCCCCHHHHH-HHHHHHHHHHHCCE---EEECCC-CCCHHHHH--HHHHHHC
Q ss_conf 8999987410110---------0----01213768899-89999999862780---782589-98899999--9886402
Q gi|254780332|r 280 RIISEQTEVPSSK---------I----RRGELTRPDYE-KIVACSQVMQKLPL---YIDQTG-GISMSQLA--TRARRLK 339 (504)
Q Consensus 280 R~is~~s~I~~~~---------i----~~g~l~~~e~~-~i~~a~~~l~~~~l---~I~d~~-~~ti~~I~--~~~r~~~ 339 (504)
T Consensus 85 ~~iG~vfQ~p~~ql~~~tV~eev~fg~~~~g~~~~e~~~~v~~~l~---~~gL~e~~~~r~p~~LSGGqkqRvaiA~aL~ 161 (280)
T PRK13649 85 KKVGLVFQFPESQLFEETVLKDVAFGPQNFGVSPEEAEALAREKLA---LVGISENLFEKNPFELSGGQMRRVAIAGILA 161 (280)
T ss_pred HHEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHH---HCCCCHHHHHCCCCCCCHHHHHHHHHHHHHH
T ss_conf 7646997465212360309999986898869999999999999998---7699746654290009999999999999997
Q ss_pred CCCCCCEEEECCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHH
Q ss_conf 24447467767135325664432113788999999999999882791999771382201689999840101432422331
Q gi|254780332|r 340 RQRGLDLLIVDYIQLMTTSKKIEENRVLEITGITMALKALAKELNIPIIALSQLSRQVENRDNKRPQLSDLRESGSIEQD 419 (504)
Q Consensus 340 ~~~gi~~vvIDYLqli~~~~~~~~~r~~~i~~is~~lK~lA~e~~ipvi~lsQLnR~~e~r~~krP~lsDLr~Sg~IEqd 419 (504)
T Consensus 162 --~~P~iLllD-----EPTsg-LDp--~~~~~i~~ll~~l~~-~G~Tii~vTH----------------d---l~~v~~~ 211 (280)
T PRK13649 162 --MEPKILVLD-----EPTAG-LDP--KGRKELMTIFKKLHQ-SGMTIVLVTH----------------L---MDDVANY 211 (280)
T ss_pred --CCCCEEEEE-----CCCCC-CCH--HHHHHHHHHHHHHHH-CCCEEEEECC----------------C---HHHHHHH
T ss_conf --499999984-----87554-899--999999999999986-3999999875----------------8---9999997
Q ss_pred CCEEEEEEC
Q ss_conf 387889725
Q gi|254780332|r 420 ADVVLFVIR 428 (504)
Q Consensus 420 AD~v~~l~R 428 (504)
T Consensus 212 aDrv~vl~~ 220 (280)
T PRK13649 212 ADFVYVLEK 220 (280)
T ss_pred CCEEEEEEC
T ss_conf 999999989