HHsearch alignment for GI: 254780332 and conserved domain: PRK13651
>PRK13651 cobalt transporter ATP-binding subunit; Provisional.
Probab=96.69 E-value=0.0019 Score=45.68 Aligned_cols=177 Identities=16% Similarity=0.279 Sum_probs=87.8
Q ss_pred CCCCHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECC-----------
Q ss_conf 321013776556416772677621310027699999999998510111233333212479758999585-----------
Q gi|254780332|r 203 STGIQTLDKQMGGLQRSDLIIIAGRPGMGKTSLATNIAYNVADAYKAELQTDGSYKTINGGIVGFYSLE----------- 271 (504)
Q Consensus 203 ~TG~~~LD~~~gGl~~G~l~Viaarpg~GKTalalniA~~~A~~~~~~~~~~~~~~~~~g~~Vl~fSlE----------- 271 (504)
T Consensus 17 ~~~~~AL~dvsl~I~~GE~v~IiG~nGsGKSTL~k~l~Gll---------------~P~~G~V~~~g~d~~~~~~~~~~~ 81 (304)
T PRK13651 17 PSELKALDGVSTEINQGEFIAIIGQTGSGKTTFIEHLNALL---------------LPDTGTIEWIYFDEKNKEKKKVVE 81 (304)
T ss_pred CCCCEEEECEEEEECCCCEEEEECCCCCCHHHHHHHHHCCC---------------CCCCCEEEEECCCCCCCCCCCCCC
T ss_conf 87446863405798599899998799985999999996699---------------988716999424543455431134
Q ss_pred ---------------------------CCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHH-HHHHHHHHHHHHCCE-EEEC
Q ss_conf ---------------------------21799987899998741011000121376889-989999999862780-7825
Q gi|254780332|r 272 ---------------------------MSSEQLATRIISEQTEVPSSKIRRGELTRPDY-EKIVACSQVMQKLPL-YIDQ 322 (504)
Q Consensus 272 ---------------------------Ms~~el~~R~is~~s~I~~~~i~~g~l~~~e~-~~i~~a~~~l~~~~l-~I~d 322 (504)
T Consensus 82 ~~~~~~~~~~~~~~~~~lr~~vG~vfQ~p~~ql~~~tV--~e~i~fg~~~~-g~~~~e~~~rv~~~l~~v-gL~~~~~~~ 157 (304)
T PRK13651 82 DPVIKLKFRKKLKKIKEIRRRVGVVFQFAEYQLFEQTI--EKDIIFGPVSM-GVSKEEAKKRAAKYIELV-GLPEEFLQK 157 (304)
T ss_pred CHHHHHHHHHHHHHHHHHHHCEEEEEECCCCCCCHHHH--HHHHHHHHHHC-CCCHHHHHHHHHHHHHHC-CCCHHHHHC
T ss_conf 30221345666666898773379995178545565059--99999999984-999999999999999986-998567518
Q ss_pred CC-CCCHHHHH--HHHHHHCCCCCCCEEEECCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCC
Q ss_conf 89-98899999--9886402244474677671353256644321137889999999999998827919997713822016
Q gi|254780332|r 323 TG-GISMSQLA--TRARRLKRQRGLDLLIVDYIQLMTTSKKIEENRVLEITGITMALKALAKELNIPIIALSQLSRQVEN 399 (504)
Q Consensus 323 ~~-~~ti~~I~--~~~r~~~~~~gi~~vvIDYLqli~~~~~~~~~r~~~i~~is~~lK~lA~e~~ipvi~lsQLnR~~e~ 399 (504)
T Consensus 158 ~p~~LSGGqkqRVaIA~~La--~~P~iLlLD-----EPTag-LDp--~~~~~i~~~l~~L~~~-G~TVI~vTH------- 219 (304)
T PRK13651 158 SPFELSGGQKRRVALAGILA--MEPDFLVFD-----EPTAG-LDP--QGVKEILEIFDTLNKK-GKTIILVTH------- 219 (304)
T ss_pred CCCCCCHHHHHHHHHHHHHH--CCCCEEEEC-----CCCCC-CCH--HHHHHHHHHHHHHHHC-CCEEEEECC-------
T ss_conf 95428999999999999884--599999972-----98665-898--9999999999999977-999999867-------
Q ss_pred CCCCCCCCCCCCCCCHHHHHCCEEEEEEC
Q ss_conf 89999840101432422331387889725
Q gi|254780332|r 400 RDNKRPQLSDLRESGSIEQDADVVLFVIR 428 (504)
Q Consensus 400 r~~krP~lsDLr~Sg~IEqdAD~v~~l~R 428 (504)
T Consensus 220 ------------dm~~v~~~adRvivl~~ 236 (304)
T PRK13651 220 ------------DLDNVLEWTKRTIFFKD 236 (304)
T ss_pred ------------CHHHHHHHCCEEEEEEC
T ss_conf ------------89999997999999989