HHsearch alignment for GI: 254780332 and conserved domain: TIGR02324
>TIGR02324 CP_lyasePhnL phosphonate C-P lyase system protein PhnL; InterPro: IPR012701 Members of this family are the PhnL protein of C-P lyase systems for utilization of phosphonates. These systems resemble phosphonatase-based systems in having a three-component ABC transporter, where IPR005769 from INTERPRO is the permease, IPR005770 from INTERPRO is the phosphonates binding protein, and IPR012693 from INTERPRO is the ATP-binding cassette (ABC) protein. They differ, however, in having, typically, ten or more additional genes, many of which are believed to form a membrane-associated C-P lyase complex. This protein (PhnL) and the adjacent-encoded PhnK (IPR012700 from INTERPRO) resemble transporter ATP-binding proteins but are suggested, based on mutagenesis studies, to be part of this C-P lyase complex rather than part of a transporter per se ..
Probab=94.36 E-value=0.24 Score=29.71 Aligned_cols=149 Identities=11% Similarity=0.158 Sum_probs=81.5
Q ss_pred CHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHH-CCCCC-----C-----CCCCCC-CCCCCEEEEEE----
Q ss_conf 01377655641677267762131002769999999999851-01112-----3-----333321-24797589995----
Q gi|254780332|r 206 IQTLDKQMGGLQRSDLIIIAGRPGMGKTSLATNIAYNVADA-YKAEL-----Q-----TDGSYK-TINGGIVGFYS---- 269 (504)
Q Consensus 206 ~~~LD~~~gGl~~G~l~Viaarpg~GKTalalniA~~~A~~-~~~~~-----~-----~~~~~~-~~~g~~Vl~fS---- 269 (504)
T Consensus 21 LpVl~~v~l~V~aGEcv~L~G~SGaGKSTlLk~lYaNYlp~~G~i~~~H~G~~~DL~~a~pr~vl~vRr~tiGYVSQFLR 100 (224)
T TIGR02324 21 LPVLKNVSLTVNAGECVALSGPSGAGKSTLLKSLYANYLPDSGRILVRHEGAWVDLAQASPREVLEVRRKTIGYVSQFLR 100 (224)
T ss_pred EEECCCCEEEEECCCEEEEECCCCCCHHHHHHHHHHCCCCCCCEEEEEECCHHHHHHCCCHHHHHHHHHHHCCCEEEEEE
T ss_conf 00006743787367358853688876789999766304746867777624047675076845778773003351555303
Q ss_pred -----------------CCCCHHHHHHHHHHHHHHHCC-CCCC---CCCCCHHHHHHHHHHHHHHHHCCEEEECCCCCCH
Q ss_conf -----------------852179998789999874101-1000---1213768899899999998627807825899889
Q gi|254780332|r 270 -----------------LEMSSEQLATRIISEQTEVPS-SKIR---RGELTRPDYEKIVACSQVMQKLPLYIDQTGGISM 328 (504)
Q Consensus 270 -----------------lEMs~~el~~R~is~~s~I~~-~~i~---~g~l~~~e~~~i~~a~~~l~~~~l~I~d~~~~ti 328 (504)
T Consensus 101 ViPRvsalevV~ePL~~~G~~~~~A~~~A~~LL~rLniPERLW~LpPaTFSGGEqQRVNIARg~i~d~PiLLLdEPTASL 180 (224)
T TIGR02324 101 VIPRVSALEVVAEPLLERGVPREAARARARELLARLNIPERLWSLPPATFSGGEQQRVNIARGFIADYPILLLDEPTASL 180 (224)
T ss_pred ECCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCC
T ss_conf 12886728888787987289589999999999975574024428878865660589999987652577400113554024
Q ss_pred HH-----HHHHHHHHCCCCCCCEEEECCHHHC
Q ss_conf 99-----9998864022444746776713532
Q gi|254780332|r 329 SQ-----LATRARRLKRQRGLDLLIVDYIQLM 355 (504)
Q Consensus 329 ~~-----I~~~~r~~~~~~gi~~vvIDYLqli 355 (504)
T Consensus 181 d~~nr~vVvELi~e~-K~~G~AliGIFHde~v 211 (224)
T TIGR02324 181 DATNRKVVVELIAEA-KARGAALIGIFHDEEV 211 (224)
T ss_pred CCCCHHHHHHHHHHH-HHCCCEEEEEECHHHH
T ss_conf 114248899999999-7659768986081899