HHsearch alignment for GI: 254780332 and conserved domain: TIGR03410
>TIGR03410 urea_trans_UrtE urea ABC transporter, ATP-binding protein UrtE. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=96.93 E-value=0.018 Score=38.31 Aligned_cols=176 Identities=18% Similarity=0.205 Sum_probs=87.8
Q ss_pred CHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECC---CCHHHHHHHHH
Q ss_conf 013776556416772677621310027699999999998510111233333212479758999585---21799987899
Q gi|254780332|r 206 IQTLDKQMGGLQRSDLIIIAGRPGMGKTSLATNIAYNVADAYKAELQTDGSYKTINGGIVGFYSLE---MSSEQLATRII 282 (504)
Q Consensus 206 ~~~LD~~~gGl~~G~l~Viaarpg~GKTalalniA~~~A~~~~~~~~~~~~~~~~~g~~Vl~fSlE---Ms~~el~~R~i 282 (504)
T Consensus 13 ~~~L~~vs~~v~~Gei~~liGpNGaGKSTL~~~i~-Gl~~p--------------~~G~I~~~G~~i~~~~~~~~~r~gi 77 (230)
T TIGR03410 13 SHILRGVSLEVPKGEVTCVLGRNGVGKTTLLKTLM-GLLPV--------------KSGSIRLDGEDITKLPPHERARAGI 77 (230)
T ss_pred EEEECCEEEEECCCCEEEEECCCCCHHHHHHHHHH-CCCCC--------------CCEEEEECCEECCCCCHHHHHHCCE
T ss_conf 66888717799999799999999940999999997-79999--------------9549999999999999899998295
Q ss_pred HHHHH-------------HCCCCCCCCCCCHHHHHHHHHHHHHHHHCCEEEEC-CCCCCHHHH--HHHHHHHCCCCCCCE
Q ss_conf 99874-------------10110001213768899899999998627807825-899889999--998864022444746
Q gi|254780332|r 283 SEQTE-------------VPSSKIRRGELTRPDYEKIVACSQVMQKLPLYIDQ-TGGISMSQL--ATRARRLKRQRGLDL 346 (504)
Q Consensus 283 s~~s~-------------I~~~~i~~g~l~~~e~~~i~~a~~~l~~~~l~I~d-~~~~ti~~I--~~~~r~~~~~~gi~~ 346 (504)
T Consensus 78 g~v~Q~~~lf~~lTV~Enl~~~~~~~~~~~~~~~~~~~~~~~~l~~~---~~r~~~~LSGGq~Qrv~iAraL~--~~P~l 152 (230)
T TIGR03410 78 AYVPQGREIFPRLTVEENLLTGLAALPRRSRKIPDEIYELFPVLKEM---LGRRGGDLSGGQQQQLAIARALV--TRPKL 152 (230)
T ss_pred EEECCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH---HHCCHHHCCHHHHHHHHHHHHHH--CCCCE
T ss_conf 99377742576788999999999874966788999999999999999---83851119999999999999996--29988
Q ss_pred EEECCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHCCEEEEE
Q ss_conf 77671353256644321137889999999999998827919997713822016899998401014324223313878897
Q gi|254780332|r 347 LIVDYIQLMTTSKKIEENRVLEITGITMALKALAKELNIPIIALSQLSRQVENRDNKRPQLSDLRESGSIEQDADVVLFV 426 (504)
Q Consensus 347 vvIDYLqli~~~~~~~~~r~~~i~~is~~lK~lA~e~~ipvi~lsQLnR~~e~r~~krP~lsDLr~Sg~IEqdAD~v~~l 426 (504)
T Consensus 153 LlLD-----EPt~g-LD--~~~~~~i~~~i~~l~~~~g~tvl~vtH----------------~---l~~~~~~adrv~vl 205 (230)
T TIGR03410 153 LLLD-----EPTEG-IQ--PSIIKDIGRVIRRLRAEGGMAILLVEQ----------------Y---LDFARELADRYYVM 205 (230)
T ss_pred EEEE-----CCCCC-CC--HHHHHHHHHHHHHHHHCCCCEEEEEEC----------------C---HHHHHHHCCEEEEE
T ss_conf 9993-----85226-99--999999999999999717989999908----------------8---89999969999999
Q ss_pred EC
Q ss_conf 25
Q gi|254780332|r 427 IR 428 (504)
Q Consensus 427 ~R 428 (504)
T Consensus 206 ~~ 207 (230)
T TIGR03410 206 ER 207 (230)
T ss_pred EC
T ss_conf 59