>cd03225 ABC_cobalt_CbiO_domain1 Domain I of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. This ABC transport system of the CbiMNQO family is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most of cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.

Probab=96.96 E-value=0.021 Score=37.83 Aligned_cols=182 Identities=21% Similarity=0.213 Sum_probs=86.3 Q ss_pred HHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC-----CCCEEEEEECCCCHHHHHHHHH Q ss_conf 37765564167726776213100276999999999985101112333332124-----7975899958521799987899 Q gi|254780332|r 208 TLDKQMGGLQRSDLIIIAGRPGMGKTSLATNIAYNVADAYKAELQTDGSYKTI-----NGGIVGFYSLEMSSEQLATRII 282 (504) Q Consensus 208 ~LD~~~gGl~~G~l~Viaarpg~GKTalalniA~~~A~~~~~~~~~~~~~~~~-----~g~~Vl~fSlEMs~~el~~R~i 282 (504) T Consensus 16 ~L~~vsl~i~~Gei~~iiG~nGaGKSTLlk~i~G-l~~p~~G~I~~~g~~i~~~~~~~~~~~ig~v~Q~-p~~~~~~~-- 91 (211) T cd03225 16 ALDDISLTIKKGEFVLIVGPNGSGKSTLLRLLNG-LLGPTSGEVLVDGKDLTKLSLKELRRKVGLVFQN-PDDQFFGP-- 91 (211) T ss_pred EEEEEEEEECCCCEEEEECCCCCCHHHHHHHHHC-CCCCCCCCEEECCEECCCCCHHHHHCCEEEEEEC-CHHHCCCC-- T ss_conf 7753178884997999988999989999999964-6779888778999999979989984038999778-32530558-- Q ss_pred HHHHHHCCCCCCCCCCCHH-HHHHHHHHHHHHHHCCEE--EECC-CCCCHHH--HHHHHHHHCCCCCCCEEEECCHHHCC Q ss_conf 9987410110001213768-899899999998627807--8258-9988999--99988640224447467767135325 Q gi|254780332|r 283 SEQTEVPSSKIRRGELTRP-DYEKIVACSQVMQKLPLY--IDQT-GGISMSQ--LATRARRLKRQRGLDLLIVDYIQLMT 356 (504) Q Consensus 283 s~~s~I~~~~i~~g~l~~~-e~~~i~~a~~~l~~~~l~--I~d~-~~~ti~~--I~~~~r~~~~~~gi~~vvIDYLqli~ 356 (504) T Consensus 92 tv~e~i~~~-~~~~~~~~~~~~~~~~~~l~~~---~l~~~~~~~~~~LSGGqkQrv~iAral~--~~P~ililD-----E 160 (211) T cd03225 92 TVEEEVAFG-LENLGLPEEEIEERVEEALELV---GLEGLRDRSPFTLSGGQKQRVAIAGVLA--MDPDILLLD-----E 160 (211) T ss_pred CHHHHHHHH-HHHCCCCHHHHHHHHHHHHHHC---CCHHHHHCCHHHCCHHHHHHHHHHHHHH--CCCCEEEEE-----C T ss_conf 699999999-9986999999999999999986---9946663895459998999999999997--599999997-----9 Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHCCEEEEEE Q ss_conf 66443211378899999999999988279199977138220168999984010143242233138788972 Q gi|254780332|r 357 TSKKIEENRVLEITGITMALKALAKELNIPIIALSQLSRQVENRDNKRPQLSDLRESGSIEQDADVVLFVI 427 (504) Q Consensus 357 ~~~~~~~~r~~~i~~is~~lK~lA~e~~ipvi~lsQLnR~~e~r~~krP~lsDLr~Sg~IEqdAD~v~~l~ 427 (504) T Consensus 161 PTsg-LD~--~~~~~i~~~l~~l~~~-g~tii~itH----------------d---l~~~~~~~dri~~m~ 208 (211) T cd03225 161 PTAG-LDP--AGRRELLELLKKLKAE-GKTIIIVTH----------------D---LDLLLELADRVIVLE 208 (211) T ss_pred CCCC-CCH--HHHHHHHHHHHHHHHC-CCEEEEEEC----------------C---HHHHHHHCCEEEEEE T ss_conf 8555-899--9999999999999978-999999925----------------9---999999799999982

HHsearch alignment for GI: 254780332 and conserved domain: cd03225