>cd03226 ABC_cobalt_CbiO_domain2 Domain II of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. The CbiMNQO family ABC transport system is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.

Probab=96.45 E-value=0.036 Score=36.02 Aligned_cols=179 Identities=22% Similarity=0.280 Sum_probs=86.1 Q ss_pred HHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC--CCCCCEEEEEECCCCHHHHHHHHHHHH Q ss_conf 377655641677267762131002769999999999851011123333321--247975899958521799987899998 Q gi|254780332|r 208 TLDKQMGGLQRSDLIIIAGRPGMGKTSLATNIAYNVADAYKAELQTDGSYK--TINGGIVGFYSLEMSSEQLATRIISEQ 285 (504) Q Consensus 208 ~LD~~~gGl~~G~l~Viaarpg~GKTalalniA~~~A~~~~~~~~~~~~~~--~~~g~~Vl~fSlEMs~~el~~R~is~~ 285 (504) T Consensus 15 vL~~vsl~i~~Gei~~iiG~nGaGKSTLl~~i~G-l~~p~~G~I~~~g~~~~~~~~~~~ig~v~Q~~-~~~l~~~--tv~ 90 (205) T cd03226 15 ILDDLSLDLYAGEIIALTGKNGAGKTTLAKILAG-LIKESSGSILLNGKPIKAKERRKSIGYVMQDV-DYQLFTD--SVR 90 (205) T ss_pred EEEEEEEEECCCCEEEEECCCCCCHHHHHHHHHC-CCCCCCCEEEECCEECCHHHHHCCEEEEEECC-CCCCCHH--HHH T ss_conf 8640378886998999988999989999999956-85777873899999996578744489996278-6442064--799 Q ss_pred HHHCCCCCCCC-CCCHHHHHHHHHHHHHHHHCCEEE-EC-C-CCCCHHH--HHHHHHHHCCCCCCCEEEECCHHHCCCCC Q ss_conf 74101100012-137688998999999986278078-25-8-9988999--99988640224447467767135325664 Q gi|254780332|r 286 TEVPSSKIRRG-ELTRPDYEKIVACSQVMQKLPLYI-DQ-T-GGISMSQ--LATRARRLKRQRGLDLLIVDYIQLMTTSK 359 (504) Q Consensus 286 s~I~~~~i~~g-~l~~~e~~~i~~a~~~l~~~~l~I-~d-~-~~~ti~~--I~~~~r~~~~~~gi~~vvIDYLqli~~~~ 359 (504) T Consensus 91 ~~-----l~~~~~~~~~~~~~~~~~l~~~---~l~~~~~~~~~~LSGGqkQrv~iA~aL~--~~P~illLD-----EPt~ 155 (205) T cd03226 91 EE-----LLLGLKELDAGNEQAETVLKDL---DLYALKERHPLSLSGGQKQRLAIAAALL--SGKDLLIFD-----EPTS 155 (205) T ss_pred HH-----HHHCCCCCCCHHHHHHHHHHHC---CCCHHHHCCHHHCCHHHHHHHHHHHHHH--CCCCEEEEE-----CCCC T ss_conf 99-----9704878560799999999976---9923553891128999999999999997--599999997-----9976 Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHCCEEEEEEC Q ss_conf 432113788999999999999882791999771382201689999840101432422331387889725 Q gi|254780332|r 360 KIEENRVLEITGITMALKALAKELNIPIIALSQLSRQVENRDNKRPQLSDLRESGSIEQDADVVLFVIR 428 (504) Q Consensus 360 ~~~~~r~~~i~~is~~lK~lA~e~~ipvi~lsQLnR~~e~r~~krP~lsDLr~Sg~IEqdAD~v~~l~R 428 (504) T Consensus 156 g-LD~--~~~~~i~~ll~~l~~~-g~tvi~itH----------------dl---~~~~~~~dri~vl~~ 201 (205) T cd03226 156 G-LDY--KNMERVGELIRELAAQ-GKAVIVITH----------------DY---EFLAKVCDRVLLLAN 201 (205) T ss_pred C-CCH--HHHHHHHHHHHHHHHC-CCEEEEEEC----------------CH---HHHHHHCCEEEEEEC T ss_conf 5-899--9999999999999979-999999803----------------98---999997999999819

HHsearch alignment for GI: 254780332 and conserved domain: cd03226