>cd03230 ABC_DR_subfamily_A This family of ATP-binding proteins belongs to a multisubunit transporter involved in drug resistance (BcrA and DrrA), nodulation, lipid transport, and lantibiotic immunity. In bacteria and archaea, these transporters usually include an ATP-binding protein and one or two integral membrane proteins. Eukaryote systems of the ABCA subfamily display ABC domains that are quite similar to this family. The ATP-binding domain shows the highest similarity between all members of the ABC transporter family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.

Probab=95.38 E-value=0.049 Score=34.98 Aligned_cols=155 Identities=20% Similarity=0.199 Sum_probs=79.0 Q ss_pred HHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHH Q ss_conf 13776556416772677621310027699999999998510111233333212479758999585217999878999987 Q gi|254780332|r 207 QTLDKQMGGLQRSDLIIIAGRPGMGKTSLATNIAYNVADAYKAELQTDGSYKTINGGIVGFYSLEMSSEQLATRIISEQT 286 (504) Q Consensus 207 ~~LD~~~gGl~~G~l~Viaarpg~GKTalalniA~~~A~~~~~~~~~~~~~~~~~g~~Vl~fSlEMs~~el~~R~is~~s 286 (504) T Consensus 14 ~~L~~vsl~i~~Gei~gl~G~NGaGKSTLl~~i~-Gl~~--------------p~~G~i~i~g~~~~~~~~~~~--~~ig 76 (173) T cd03230 14 TALDDISLTVEKGEIYGLLGPNGAGKTTLIKIIL-GLLK--------------PDSGEIKVLGKDIKKEPEEVK--RRIG 76 (173) T ss_pred EEEECEEEEECCCCEEEEECCCCCCHHHHHHHHH-CCCC--------------CCCCEEEECCEECCCCHHHHH--CCEE T ss_conf 9982208788799399998789979999999997-6857--------------787889999999886848886--5789 Q ss_pred HHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCEEEECCCCCCHH--HHHHHHHHHCCCCCCCEEEECCHHHCCCCCCCCCH Q ss_conf 4101100012137688998999999986278078258998899--99998864022444746776713532566443211 Q gi|254780332|r 287 EVPSSKIRRGELTRPDYEKIVACSQVMQKLPLYIDQTGGISMS--QLATRARRLKRQRGLDLLIVDYIQLMTTSKKIEEN 364 (504) Q Consensus 287 ~I~~~~i~~g~l~~~e~~~i~~a~~~l~~~~l~I~d~~~~ti~--~I~~~~r~~~~~~gi~~vvIDYLqli~~~~~~~~~ 364 (504) T Consensus 77 ~v~q~~~l~~~ltv~e~--l------------------~LSgG~kqrv~ia~al~--~~p~lllLD-----EPt~g-LD~ 128 (173) T cd03230 77 YLPEEPSLYENLTVREN--L------------------KLSGGMKQRLALAQALL--HDPELLILD-----EPTSG-LDP 128 (173) T ss_pred EEECCCCCCCCCCHHHH--H------------------HCCHHHHHHHHHHHHHH--CCCCEEEEC-----CCCCC-CCH T ss_conf 99568766712677898--6------------------33989999999999996--499999990-----88657-999 Q ss_pred HHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHCCEEEEEEC Q ss_conf 3788999999999999882791999771382201689999840101432422331387889725 Q gi|254780332|r 365 RVLEITGITMALKALAKELNIPIIALSQLSRQVENRDNKRPQLSDLRESGSIEQDADVVLFVIR 428 (504) Q Consensus 365 r~~~i~~is~~lK~lA~e~~ipvi~lsQLnR~~e~r~~krP~lsDLr~Sg~IEqdAD~v~~l~R 428 (504) T Consensus 129 --~~~~~i~~~i~~l~~~-g~tvi~~tH-------------------~l~~~~~~~dri~vl~~ 170 (173) T cd03230 129 --ESRREFWELLRELKKE-GKTILLSSH-------------------ILEEAERLCDRVAILNN 170 (173) T ss_pred --HHHHHHHHHHHHHHHC-CCEEEEECC-------------------CHHHHHHHCCEEEEEEC T ss_conf --9999999999999968-999999928-------------------38999986999999939

HHsearch alignment for GI: 254780332 and conserved domain: cd03230