HHsearch alignment for GI: 254780332 and conserved domain: cd03250
>cd03250 ABCC_MRP_domain1 Domain 1 of the ABC subfamily C. This family is also known as MRP (mulrtidrug resisitance-associated protein). Some of the MRP members have five additional transmembrane segments in their N-terminas, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resisting lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions, such as glutathione, glucuronate, and sulfate.
Probab=96.98 E-value=0.0069 Score=41.47 Aligned_cols=171 Identities=19% Similarity=0.252 Sum_probs=81.4
Q ss_pred HHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHH
Q ss_conf 37765564167726776213100276999999999985101112333332124797589995852179998789999874
Q gi|254780332|r 208 TLDKQMGGLQRSDLIIIAGRPGMGKTSLATNIAYNVADAYKAELQTDGSYKTINGGIVGFYSLEMSSEQLATRIISEQTE 287 (504)
Q Consensus 208 ~LD~~~gGl~~G~l~Viaarpg~GKTalalniA~~~A~~~~~~~~~~~~~~~~~g~~Vl~fSlEMs~~el~~R~is~~s~ 287 (504)
T Consensus 20 vL~~isl~i~~Ge~~~IvG~sGsGKSTLl~~i~G-~~~~~~G~I-------~~~-g~i~~v~Q~~---~l~~~--Tv~eN 85 (204)
T cd03250 20 TLKDINLEVPKGELVAIVGPVGSGKSSLLSALLG-ELEKLSGSV-------SVP-GSIAYVSQEP---WIQNG--TIREN 85 (204)
T ss_pred EEEEEEEEECCCCEEEEECCCCCCHHHHHHHHCC-CCCCCCCCC-------CCC-CCEEEEECCC---CCCCC--CHHHH
T ss_conf 2521489976998999999999858999999818-952568952-------258-9889995877---56775--09999
Q ss_pred HCCCCCCCCCCCHHHHHHHHHHH---HHHHHCCE----EEECC-CCCCHHHH--HHHHHHHCCCCCCCEEEECCHHHCCC
Q ss_conf 10110001213768899899999---99862780----78258-99889999--99886402244474677671353256
Q gi|254780332|r 288 VPSSKIRRGELTRPDYEKIVACS---QVMQKLPL----YIDQT-GGISMSQL--ATRARRLKRQRGLDLLIVDYIQLMTT 357 (504)
Q Consensus 288 I~~~~i~~g~l~~~e~~~i~~a~---~~l~~~~l----~I~d~-~~~ti~~I--~~~~r~~~~~~gi~~vvIDYLqli~~ 357 (504)
T Consensus 86 i~~~----~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~i~~~~~~LSgGQkQRvalARal~~--~~~illlD-----EP 154 (204)
T cd03250 86 ILFG----KPFDEERYEKVIKACALEPDLEILPDGDLTEIGEKGINLSGGQKQRISLARAVYS--DADIYLLD-----DP 154 (204)
T ss_pred HHCC----CCCCHHHHHHHHHHHCCHHHHHHHHCCCCCEECCCCCCCCHHHHHHHHHHHHHHC--CCCEEEEE-----CC
T ss_conf 7446----8668899999999976198898513535245237887579999999999999953--99999996-----98
Q ss_pred CCCCCCHHHHHHHHHHHH-HHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHCCEEEEEE
Q ss_conf 644321137889999999-9999988279199977138220168999984010143242233138788972
Q gi|254780332|r 358 SKKIEENRVLEITGITMA-LKALAKELNIPIIALSQLSRQVENRDNKRPQLSDLRESGSIEQDADVVLFVI 427 (504)
Q Consensus 358 ~~~~~~~r~~~i~~is~~-lK~lA~e~~ipvi~lsQLnR~~e~r~~krP~lsDLr~Sg~IEqdAD~v~~l~ 427 (504)
T Consensus 155 ts~L-D~~~~--~~i~~~l~~~~~~-~~~Tvi~itH----------------~~---~~~-~~~D~ii~l~ 201 (204)
T cd03250 155 LSAV-DAHVG--RHIFENCILGLLL-NNKTRILVTH----------------QL---QLL-PHADQIVVLD 201 (204)
T ss_pred CCCC-CHHHH--HHHHHHHHHHHHH-CCCEEEEECC----------------CH---HHH-HHCCEEEEEC
T ss_conf 7666-99999--9999999999860-8989999807----------------99---999-7099999972