>cd03254 ABCC_Glucan_exporter_like Glucan exporter ATP-binding protein. In A. tumefaciens cyclic beta-1, 2-glucan must be transported into the periplasmic space to exert its action as a virluence factor. This subfamily belongs to the MRP-like family and is involved in drug, peptide, and lipid export. The MRP-like family, similar to all ABC proteins, have a common four-domain core structure constituted by two membrane-spanning domains each composed of six transmembrane (TM) helices and two nucleotide-binding domains (NBD). ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.

Probab=96.66 E-value=0.0091 Score=40.53 Aligned_cols=172 Identities=24% Similarity=0.329 Sum_probs=85.4 Q ss_pred HHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEC---CCCHHHHHHHHHHH Q ss_conf 377655641677267762131002769999999999851011123333321247975899958---52179998789999 Q gi|254780332|r 208 TLDKQMGGLQRSDLIIIAGRPGMGKTSLATNIAYNVADAYKAELQTDGSYKTINGGIVGFYSL---EMSSEQLATRIISE 284 (504) Q Consensus 208 ~LD~~~gGl~~G~l~Viaarpg~GKTalalniA~~~A~~~~~~~~~~~~~~~~~g~~Vl~fSl---EMs~~el~~R~is~ 284 (504) T Consensus 18 vL~~inl~i~~Ge~vaivG~sGsGKSTLl~ll~g-l~~p-------------~~G-~I~idg~~i~~~~~~~~r~~-i~~ 81 (229) T cd03254 18 VLKDINFSIKPGETVAIVGPTGAGKTTLINLLMR-FYDP-------------QKG-QILIDGIDIRDISRKSLRSM-IGV 81 (229) T ss_pred EEECEEEEECCCCEEEEECCCCCHHHHHHHHHHC-CCCC-------------CCC-EEEECCEECCCCCHHHHHHC-EEE T ss_conf 8746299987999999999999809999999966-8667-------------873-89999999541899999632-899 Q ss_pred HHHHC-------CCCCCCC--CCCHHHHHHHHHHH---HHHHHCC----EEEEC-CCCCCHHHH--HHHHHHHCCCCCCC Q ss_conf 87410-------1100012--13768899899999---9986278----07825-899889999--99886402244474 Q gi|254780332|r 285 QTEVP-------SSKIRRG--ELTRPDYEKIVACS---QVMQKLP----LYIDQ-TGGISMSQL--ATRARRLKRQRGLD 345 (504) Q Consensus 285 ~s~I~-------~~~i~~g--~l~~~e~~~i~~a~---~~l~~~~----l~I~d-~~~~ti~~I--~~~~r~~~~~~gi~ 345 (504) T Consensus 82 v~Q~~~lf~~Ti~~Ni~~~~~~~~~~~~~~~l~~~~l~~~i~~l~~gl~t~i~~~g~~LSgGq~Qri~lARal~--~~~~ 159 (229) T cd03254 82 VLQDTFLFSGTIMENIRLGRPNATDEEVIEAAKEAGAHDFIMKLPNGYDTVLGENGGNLSQGERQLLAIARAML--RDPK 159 (229) T ss_pred ECCCCEECCCCHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH--CCCC T ss_conf 90389875745999840589999999999999984004588758464578615786449999999999999995--1899 Q ss_pred EEEECCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHCCEEEE Q ss_conf 67767135325664432113788999999999999882791999771382201689999840101432422331387889 Q gi|254780332|r 346 LLIVDYIQLMTTSKKIEENRVLEITGITMALKALAKELNIPIIALSQLSRQVENRDNKRPQLSDLRESGSIEQDADVVLF 425 (504) Q Consensus 346 ~vvIDYLqli~~~~~~~~~r~~~i~~is~~lK~lA~e~~ipvi~lsQLnR~~e~r~~krP~lsDLr~Sg~IEqdAD~v~~ 425 (504) T Consensus 160 illlD-----Epts~L-D~~t--~~~i~~~l~~~~~--~~TvI~itH-------~---------~---~~~-~~~D~iiv 209 (229) T cd03254 160 ILILD-----EATSNI-DTET--EKLIQEALEKLMK--GRTSIIIAH-------R---------L---STI-KNADKILV 209 (229) T ss_pred EEEEE-----CCCCCC-CHHH--HHHHHHHHHHHCC--CCEEEEEEC-------C---------H---HHH-HHCCEEEE T ss_conf 89998-----977789-9899--9999999999809--988999926-------9---------8---899-85999999 Q ss_pred EE Q ss_conf 72 Q gi|254780332|r 426 VI 427 (504) Q Consensus 426 l~ 427 (504) T Consensus 210 l~ 211 (229) T cd03254 210 LD 211 (229) T ss_pred EE T ss_conf 98

HHsearch alignment for GI: 254780332 and conserved domain: cd03254