HHsearch alignment for GI: 254780332 and conserved domain: cd03258

>cd03258 ABC_MetN_methionine_transporter MetN (also known as YusC) is an ABC-type transporter encoded by metN of the metNPQ operon in Bacillus subtilis that is involved in methionine transport. Other members of this system include the MetP permease and the MetQ substrate binding protein. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=97.04  E-value=0.0065  Score=41.64  Aligned_cols=176  Identities=19%  Similarity=0.286  Sum_probs=91.4

Q ss_pred             CHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEE---CCCCHHHHHH--H
Q ss_conf             0137765564167726776213100276999999999985101112333332124797589995---8521799987--8
Q gi|254780332|r  206 IQTLDKQMGGLQRSDLIIIAGRPGMGKTSLATNIAYNVADAYKAELQTDGSYKTINGGIVGFYS---LEMSSEQLAT--R  280 (504)
Q Consensus       206 ~~~LD~~~gGl~~G~l~Viaarpg~GKTalalniA~~~A~~~~~~~~~~~~~~~~~g~~Vl~fS---lEMs~~el~~--R  280 (504)
T Consensus        18 ~~al~~vsl~i~~Ge~~~ivG~SGsGKSTllr~i~g-L~~--------------p~sG~I~~~g~~i~~~~~~~~~~~Rr   82 (233)
T cd03258          18 VTALKDVSLSVPKGEIFGIIGRSGAGKSTLIRCING-LER--------------PTSGSVLVDGTDLTLLSGKELRKARR   82 (233)
T ss_pred             EEEEECCEEEECCCCEEEEECCCCCHHHHHHHHHHC-CCC--------------CCCCEEEECCEECCCCCHHHHHHHHC
T ss_conf             999848288999999999988980589999999967-999--------------99808999999989799999999862


Q ss_pred             HHHHHHH----HCCCC--------CCCCCCCHHHH-HHHHHHHHHHHHCCEE--EECCC-CCCHHH--HHHHHHHHCCCC
Q ss_conf             9999874----10110--------00121376889-9899999998627807--82589-988999--999886402244
Q gi|254780332|r  281 IISEQTE----VPSSK--------IRRGELTRPDY-EKIVACSQVMQKLPLY--IDQTG-GISMSQ--LATRARRLKRQR  342 (504)
Q Consensus       281 ~is~~s~----I~~~~--------i~~g~l~~~e~-~~i~~a~~~l~~~~l~--I~d~~-~~ti~~--I~~~~r~~~~~~  342 (504)
T Consensus        83 ~ig~VFQ~~~L~~~~tv~~nv~~~l~~~~~~~~~~~~r~~~l---L~~vgL~~~~~~yP~eLSGGq~QRVaIARAL~--~  157 (233)
T cd03258          83 RIGMIFQHFNLLSSRTVFENVALPLEIAGVPKAEIEERVLEL---LELVGLEDKADAYPAQLSGGQKQRVGIARALA--N  157 (233)
T ss_pred             CCCEEECCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHH---HHHCCCHHHHHCCCCCCCHHHHHHHHHHHHHH--C
T ss_conf             587794377889988399999999997499999999999999---98679916762696526778889999999983--3


Q ss_pred             CCCEEEECCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHCCE
Q ss_conf             47467767135325664432113788999999999999882791999771382201689999840101432422331387
Q gi|254780332|r  343 GLDLLIVDYIQLMTTSKKIEENRVLEITGITMALKALAKELNIPIIALSQLSRQVENRDNKRPQLSDLRESGSIEQDADV  422 (504)
Q Consensus       343 gi~~vvIDYLqli~~~~~~~~~r~~~i~~is~~lK~lA~e~~ipvi~lsQLnR~~e~r~~krP~lsDLr~Sg~IEqdAD~  422 (504)
T Consensus       158 ~P~lllaD-----EPTs~L-D~~~--~~~il~ll~~l~~e~g~t~i~vTH----------------D---l~~~~~~adr  210 (233)
T cd03258         158 NPKVLLCD-----EATSAL-DPET--TQSILALLRDINRELGLTIVLITH----------------E---MEVVKRICDR  210 (233)
T ss_pred             CCCEEEEC-----CCCCCC-CHHH--HHHHHHHHHHHHHHHCCEEEEECC----------------C---HHHHHHHCCE
T ss_conf             99899965-----976646-9889--999999999999972989999898----------------9---9999986997


Q ss_pred             EEEEEC
Q ss_conf             889725
Q gi|254780332|r  423 VLFVIR  428 (504)
Q Consensus       423 v~~l~R  428 (504)
T Consensus       211 v~vm~~  216 (233)
T cd03258         211 VAVMEK  216 (233)
T ss_pred             EEEEEC
T ss_conf             999979