HHsearch alignment for GI: 254780332 and conserved domain: cd03260
>cd03260 ABC_PstB_phosphate_transporter Phosphate uptake is of fundamental importance in the cell physiology of bacteria because phosphate is required as a nutrient. The Pst system of E. coli comprises four distinct subunits encoded by the pstS, pstA, pstB, and pstC genes. The PstS protein is a phosphate-binding protein located in the periplasmic space. P stA and PstC are hydrophobic and they form the transmembrane portion of the Pst system. PstB is the catalytic subunit, which couples the energy of ATP hydrolysis to the import of phosphate across cellular membranes through the Pst system, often referred as ABC-protein. PstB belongs to one of the largest superfamilies of proteins characterized by a highly conserved adenosine triphosphate (ATP) binding cassette (ABC), which is also a nucleotide binding domain (NBD).
Probab=95.91 E-value=0.046 Score=35.19 Aligned_cols=180 Identities=17% Similarity=0.199 Sum_probs=83.3
Q ss_pred CHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCC-----CHHHHHHH
Q ss_conf 0137765564167726776213100276999999999985101112333332124797589995852-----17999878
Q gi|254780332|r 206 IQTLDKQMGGLQRSDLIIIAGRPGMGKTSLATNIAYNVADAYKAELQTDGSYKTINGGIVGFYSLEM-----SSEQLATR 280 (504)
Q Consensus 206 ~~~LD~~~gGl~~G~l~Viaarpg~GKTalalniA~~~A~~~~~~~~~~~~~~~~~g~~Vl~fSlEM-----s~~el~~R 280 (504)
T Consensus 13 ~~~L~~isl~i~~Ge~~~iiG~SGsGKSTll~~i~gL~~~~~~~----------p~~G~I~~~g~~i~~~~~~~~~~-R~ 81 (227)
T cd03260 13 KHALKDISLDIPKGEITALIGPSGCGKSTLLRLLNRLNDLIPGA----------PDEGEVLLDGKDIYDLDVDVLEL-RR 81 (227)
T ss_pred EEEEECEEEEECCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCC----------CCCEEEEECCEECCCCCCCHHHH-HH
T ss_conf 98883406788799899999999981999999997445026899----------81469999999998899587889-62
Q ss_pred HHH------------HHHHHCCCCCCCCCCCHHH-HHHHHHHHHHHHHCCEEEECC--C-CCCHHH--HHHHHHHHCCCC
Q ss_conf 999------------9874101100012137688-998999999986278078258--9-988999--999886402244
Q gi|254780332|r 281 IIS------------EQTEVPSSKIRRGELTRPD-YEKIVACSQVMQKLPLYIDQT--G-GISMSQ--LATRARRLKRQR 342 (504)
Q Consensus 281 ~is------------~~s~I~~~~i~~g~l~~~e-~~~i~~a~~~l~~~~l~I~d~--~-~~ti~~--I~~~~r~~~~~~ 342 (504)
T Consensus 82 ~ig~VfQ~~~lf~~TV~eNi~~~l~~~~~~~~~~~~~~v~~~L~~vg-L~~~~~~~~~p~~LSGGq~QRvaIArAL~--~ 158 (227)
T cd03260 82 RVGMVFQKPNPFPGSIYDNVAYGLRLHGIKLKEELDERVEEALRKAA-LWDEVKDRLHALGLSGGQQQRLCLARALA--N 158 (227)
T ss_pred CCEEECCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCC-CCHHHHCCCCCCCCCHHHHHHHHHHHHHH--C
T ss_conf 82687647766778099999999998389999999999999998779-97588445680228999999999999983--5
Q ss_pred CCCEEEECCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHCCE
Q ss_conf 47467767135325664432113788999999999999882791999771382201689999840101432422331387
Q gi|254780332|r 343 GLDLLIVDYIQLMTTSKKIEENRVLEITGITMALKALAKELNIPIIALSQLSRQVENRDNKRPQLSDLRESGSIEQDADV 422 (504)
Q Consensus 343 gi~~vvIDYLqli~~~~~~~~~r~~~i~~is~~lK~lA~e~~ipvi~lsQLnR~~e~r~~krP~lsDLr~Sg~IEqdAD~ 422 (504)
T Consensus 159 ~P~iLllD-----EPTs~L-D~--~~~~~i~~li~~l~~~--~Tii~vTH----------------d---l~~a~~~aDr 209 (227)
T cd03260 159 EPEVLLLD-----EPTSAL-DP--ISTAKIEELIAELKKE--YTIVIVTH----------------N---MQQAARVADR 209 (227)
T ss_pred CCCEEEEC-----CCCCCC-CH--HHHHHHHHHHHHHHHC--CEEEEEEC----------------C---HHHHHHHCCE
T ss_conf 99999968-----987657-98--9999999999999668--88999936----------------9---9999986999
Q ss_pred EEEEEC
Q ss_conf 889725
Q gi|254780332|r 423 VLFVIR 428 (504)
Q Consensus 423 v~~l~R 428 (504)
T Consensus 210 i~vl~~ 215 (227)
T cd03260 210 TAFLLN 215 (227)
T ss_pred EEEEEC
T ss_conf 999989