HHsearch alignment for GI: 254780332 and conserved domain: cd03261

>cd03261 ABC_Org_Solvent_Resistant ABC (ATP-binding cassette) transport system involved in resistant to organic solvents; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=97.38  E-value=0.0025  Score=44.84  Aligned_cols=176  Identities=20%  Similarity=0.212  Sum_probs=92.1

Q ss_pred             CHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCC---CHHHHH--HH
Q ss_conf             0137765564167726776213100276999999999985101112333332124797589995852---179998--78
Q gi|254780332|r  206 IQTLDKQMGGLQRSDLIIIAGRPGMGKTSLATNIAYNVADAYKAELQTDGSYKTINGGIVGFYSLEM---SSEQLA--TR  280 (504)
Q Consensus       206 ~~~LD~~~gGl~~G~l~Viaarpg~GKTalalniA~~~A~~~~~~~~~~~~~~~~~g~~Vl~fSlEM---s~~el~--~R  280 (504)
T Consensus        13 ~~~L~~isl~i~~Ge~~~iiG~SGsGKSTll~~i~g-L~~p--------------~~G~I~~~g~~i~~~~~~~~~~~r~   77 (235)
T cd03261          13 RTVLKGVDLDVRRGEILAIIGPSGSGKSTLLRLIVG-LLRP--------------DSGEVLIDGEDISGLSEAELYRLRR   77 (235)
T ss_pred             EEEECCEEEEECCCCEEEEECCCCCHHHHHHHHHHC-CCCC--------------CCCEEEECCEECCCCCHHHHHHHHC
T ss_conf             988826064887998999999999729999999975-9998--------------9858999999999899889999757


Q ss_pred             HHHH-------------HHHHCCCCCCCCCCCHHHHH-HHHHHHHHHHHCCEE--EECCC-CCC--HHHHHHHHHHHCCC
Q ss_conf             9999-------------87410110001213768899-899999998627807--82589-988--99999988640224
Q gi|254780332|r  281 IISE-------------QTEVPSSKIRRGELTRPDYE-KIVACSQVMQKLPLY--IDQTG-GIS--MSQLATRARRLKRQ  341 (504)
Q Consensus       281 ~is~-------------~s~I~~~~i~~g~l~~~e~~-~i~~a~~~l~~~~l~--I~d~~-~~t--i~~I~~~~r~~~~~  341 (504)
T Consensus        78 ~ig~vfQ~~~Lf~~lTv~eNv~~~l~~~~~~~~~~~~~r~~~~L---~~vgL~~~~~~~p~~LSGGq~QRvaIARALv--  152 (235)
T cd03261          78 RMGMLFQSGALFDSLTVFENVAFPLREHTRLSEEEIREIVLEKL---EAVGLRGAEDLYPAELSGGMKKRVALARALA--  152 (235)
T ss_pred             CEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHH---HHCCCCHHHHCCCCCCCHHHHHHHHHHHHHH--
T ss_conf             82997049865899969999999999957999999999999999---8679925764784106999999999999985--


Q ss_pred             CCCCEEEECCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHCC
Q ss_conf             44746776713532566443211378899999999999988279199977138220168999984010143242233138
Q gi|254780332|r  342 RGLDLLIVDYIQLMTTSKKIEENRVLEITGITMALKALAKELNIPIIALSQLSRQVENRDNKRPQLSDLRESGSIEQDAD  421 (504)
Q Consensus       342 ~gi~~vvIDYLqli~~~~~~~~~r~~~i~~is~~lK~lA~e~~ipvi~lsQLnR~~e~r~~krP~lsDLr~Sg~IEqdAD  421 (504)
T Consensus       153 ~~P~illlD-----EPts~-LDp--~~~~~i~~li~~l~~~~g~T~i~vTH----------------d---~~~a~~~~D  205 (235)
T cd03261         153 LDPELLLYD-----EPTAG-LDP--IASGVIDDLIRSLKKELGLTSIMVTH----------------D---LDTAFAIAD  205 (235)
T ss_pred             CCCCEEEEE-----CCCCC-CCH--HHHHHHHHHHHHHHHHHCCEEEEECC----------------C---HHHHHHHCC
T ss_conf             489989980-----88664-798--99999999999999972999999898----------------9---899999699


Q ss_pred             EEEEEEC
Q ss_conf             7889725
Q gi|254780332|r  422 VVLFVIR  428 (504)
Q Consensus       422 ~v~~l~R  428 (504)
T Consensus       206 ri~vm~~  212 (235)
T cd03261         206 RIAVLYD  212 (235)
T ss_pred             EEEEEEC
T ss_conf             8999989