HHsearch alignment for GI: 254780332 and conserved domain: cd03297
>cd03297 ABC_ModC_molybdenum_transporter ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=96.78 E-value=0.012 Score=39.71 Aligned_cols=167 Identities=20% Similarity=0.236 Sum_probs=83.2
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCC---------CCCCCCEEEEEEC------CCCHHHHHHHHH
Q ss_conf 7726776213100276999999999985101112333332---------1247975899958------521799987899
Q gi|254780332|r 218 RSDLIIIAGRPGMGKTSLATNIAYNVADAYKAELQTDGSY---------KTINGGIVGFYSL------EMSSEQLATRII 282 (504)
Q Consensus 218 ~G~l~Viaarpg~GKTalalniA~~~A~~~~~~~~~~~~~---------~~~~g~~Vl~fSl------EMs~~el~~R~i 282 (504)
T Consensus 22 ~ge~~~iiGpSGsGKSTll~~i~-GL~~p~sG~I~~~G~~~~~~~~~~~~~~~~r~ig~VfQ~~~Lfp~ltV~eNi~--- 97 (214)
T cd03297 22 NEEVTGIFGASGAGKSTLLRCIA-GLEKPDGGTIVLNGTVLFDSRKKINLPPQQRKIGLVFQQYALFPHLNVRENLA--- 97 (214)
T ss_pred CCCEEEEECCCCCHHHHHHHHHH-CCCCCCCEEEEECCEECCCCCCCCCCCCCCCCEEEEECCCCCCCCCCHHHHHH---
T ss_conf 99799999999735999999998-49999964999999997665412467713487589767876578891999998---
Q ss_pred HHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCEEEECCC-CCCH--HHHHHHHHHHCCCCCCCEEEECCHHHCCCCC
Q ss_conf 998741011000121376889989999999862780782589-9889--9999988640224447467767135325664
Q gi|254780332|r 283 SEQTEVPSSKIRRGELTRPDYEKIVACSQVMQKLPLYIDQTG-GISM--SQLATRARRLKRQRGLDLLIVDYIQLMTTSK 359 (504)
Q Consensus 283 s~~s~I~~~~i~~g~l~~~e~~~i~~a~~~l~~~~l~I~d~~-~~ti--~~I~~~~r~~~~~~gi~~vvIDYLqli~~~~ 359 (504)
T Consensus 98 -----~~l~-~~---~~~~~~~~v~e~l~~~g-l~~~~~~~P~~LSGGq~QRVaiARAL~--~~P~llLlD-----EP~s 160 (214)
T cd03297 98 -----FGLK-RK---RNREDRISVDELLDLLG-LDHLLNRYPAQLSGGEKQRVALARALA--AQPELLLLD-----EPFS 160 (214)
T ss_pred -----HHHC-CC---CHHHHHHHHHHHHHHCC-CHHHHHCCHHHCCHHHHHHHHHHHHHH--CCCCEEEEE-----CCCC
T ss_conf -----8876-79---86899999999998779-977860897779929999999999987--199999980-----8876
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHCCEEEEEE
Q ss_conf 43211378899999999999988279199977138220168999984010143242233138788972
Q gi|254780332|r 360 KIEENRVLEITGITMALKALAKELNIPIIALSQLSRQVENRDNKRPQLSDLRESGSIEQDADVVLFVI 427 (504)
Q Consensus 360 ~~~~~r~~~i~~is~~lK~lA~e~~ipvi~lsQLnR~~e~r~~krP~lsDLr~Sg~IEqdAD~v~~l~ 427 (504)
T Consensus 161 a-LD~~~--~~~i~~~l~~l~~~~~~t~i~VTH----------------d---~~e~~~ladrv~vm~ 206 (214)
T cd03297 161 A-LDRAL--RLQLLPELKQIKKNLNIPVIFVTH----------------D---LSEAEYLADRIVVME 206 (214)
T ss_pred C-CCHHH--HHHHHHHHHHHHHHHCCEEEEECC----------------C---HHHHHHHCCEEEEEE
T ss_conf 6-69999--999999999999985998999989----------------9---999999699999998