HHsearch alignment for GI: 254780332 and conserved domain: cd03299
>cd03299 ABC_ModC_like Archeal protein closely related to ModC. ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=97.31 E-value=0.0056 Score=42.15 Aligned_cols=178 Identities=16% Similarity=0.261 Sum_probs=86.6
Q ss_pred HHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC---CCCCCEEEEEEC------CCCHHHHHH
Q ss_conf 77655641677267762131002769999999999851011123333321---247975899958------521799987
Q gi|254780332|r 209 LDKQMGGLQRSDLIIIAGRPGMGKTSLATNIAYNVADAYKAELQTDGSYK---TINGGIVGFYSL------EMSSEQLAT 279 (504)
Q Consensus 209 LD~~~gGl~~G~l~Viaarpg~GKTalalniA~~~A~~~~~~~~~~~~~~---~~~g~~Vl~fSl------EMs~~el~~ 279 (504)
T Consensus 15 L~~vs~~v~~Ge~~~iiGpSGsGKSTLlr~i~-Gl~~p~~G~I~~~G~di~~~~~~~r~ig~vfQ~~~Lfp~~tV~eN-- 91 (235)
T cd03299 15 LKNVSLEVERGDYFVILGPTGSGKSVLLETIA-GFIKPDSGKILLNGKDITNLPPEKRDISYVPQNYALFPHMTVYKN-- 91 (235)
T ss_pred ECCCEEEECCCCEEEEECCCCCHHHHHHHHHH-CCCCCCCEEEEECCEECCCCCHHHCCEEEECCCCCCCCCCCHHHH--
T ss_conf 90148798899899999999635999999997-499999659999999999999767897894579866899909999--
Q ss_pred HHHHHHHHHCCCCCCCCCCCHHHH-HHHHHHHHHHHHCCEEEECCC-CCCHH--HHHHHHHHHCCCCCCCEEEECCHHHC
Q ss_conf 899998741011000121376889-989999999862780782589-98899--99998864022444746776713532
Q gi|254780332|r 280 RIISEQTEVPSSKIRRGELTRPDY-EKIVACSQVMQKLPLYIDQTG-GISMS--QLATRARRLKRQRGLDLLIVDYIQLM 355 (504)
Q Consensus 280 R~is~~s~I~~~~i~~g~l~~~e~-~~i~~a~~~l~~~~l~I~d~~-~~ti~--~I~~~~r~~~~~~gi~~vvIDYLqli 355 (504)
T Consensus 92 --------i~~~-l~~~~~~~~e~~~rv~e~l~~~g-l~~~~~~~p~~LSGGq~QRVaiARAl~--~~P~llllD----- 154 (235)
T cd03299 92 --------IAYG-LKKRKVDKKEIERKVLEIAEMLG-IDHLLNRKPETLSGGEQQRVAIARALV--VNPKILLLD----- 154 (235)
T ss_pred --------HHHH-HHHCCCCHHHHHHHHHHHHHHCC-CHHHHHCCHHHCCHHHHHHHHHHHHHH--CCCCEEEEE-----
T ss_conf --------9999-98769999999999999998779-977874894458999999999999997--389989992-----
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHCCEEEEEEC
Q ss_conf 5664432113788999999999999882791999771382201689999840101432422331387889725
Q gi|254780332|r 356 TTSKKIEENRVLEITGITMALKALAKELNIPIIALSQLSRQVENRDNKRPQLSDLRESGSIEQDADVVLFVIR 428 (504)
Q Consensus 356 ~~~~~~~~~r~~~i~~is~~lK~lA~e~~ipvi~lsQLnR~~e~r~~krP~lsDLr~Sg~IEqdAD~v~~l~R 428 (504)
T Consensus 155 EP~s~-LD~--~~~~~i~~~l~~l~~~~~~T~i~vTH----------------d~---~~a~~~aDri~vl~~ 205 (235)
T cd03299 155 EPFSA-LDV--RTKEKLREELKKIRKEFGVTVLHVTH----------------DF---EEAWALADKVAIMLN 205 (235)
T ss_pred CCCCC-CCH--HHHHHHHHHHHHHHHHHCCEEEEECC----------------CH---HHHHHHCCEEEEEEC
T ss_conf 88764-699--99999999999999982999999878----------------99---999996999999989