HHsearch alignment for GI: 254780332 and conserved domain: cd03299

>cd03299 ABC_ModC_like Archeal protein closely related to ModC. ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=97.31  E-value=0.0056  Score=42.15  Aligned_cols=178  Identities=16%  Similarity=0.261  Sum_probs=86.6

Q ss_pred             HHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC---CCCCCEEEEEEC------CCCHHHHHH
Q ss_conf             77655641677267762131002769999999999851011123333321---247975899958------521799987
Q gi|254780332|r  209 LDKQMGGLQRSDLIIIAGRPGMGKTSLATNIAYNVADAYKAELQTDGSYK---TINGGIVGFYSL------EMSSEQLAT  279 (504)
Q Consensus       209 LD~~~gGl~~G~l~Viaarpg~GKTalalniA~~~A~~~~~~~~~~~~~~---~~~g~~Vl~fSl------EMs~~el~~  279 (504)
T Consensus        15 L~~vs~~v~~Ge~~~iiGpSGsGKSTLlr~i~-Gl~~p~~G~I~~~G~di~~~~~~~r~ig~vfQ~~~Lfp~~tV~eN--   91 (235)
T cd03299          15 LKNVSLEVERGDYFVILGPTGSGKSVLLETIA-GFIKPDSGKILLNGKDITNLPPEKRDISYVPQNYALFPHMTVYKN--   91 (235)
T ss_pred             ECCCEEEECCCCEEEEECCCCCHHHHHHHHHH-CCCCCCCEEEEECCEECCCCCHHHCCEEEECCCCCCCCCCCHHHH--
T ss_conf             90148798899899999999635999999997-499999659999999999999767897894579866899909999--


Q ss_pred             HHHHHHHHHCCCCCCCCCCCHHHH-HHHHHHHHHHHHCCEEEECCC-CCCHH--HHHHHHHHHCCCCCCCEEEECCHHHC
Q ss_conf             899998741011000121376889-989999999862780782589-98899--99998864022444746776713532
Q gi|254780332|r  280 RIISEQTEVPSSKIRRGELTRPDY-EKIVACSQVMQKLPLYIDQTG-GISMS--QLATRARRLKRQRGLDLLIVDYIQLM  355 (504)
Q Consensus       280 R~is~~s~I~~~~i~~g~l~~~e~-~~i~~a~~~l~~~~l~I~d~~-~~ti~--~I~~~~r~~~~~~gi~~vvIDYLqli  355 (504)
T Consensus        92 --------i~~~-l~~~~~~~~e~~~rv~e~l~~~g-l~~~~~~~p~~LSGGq~QRVaiARAl~--~~P~llllD-----  154 (235)
T cd03299          92 --------IAYG-LKKRKVDKKEIERKVLEIAEMLG-IDHLLNRKPETLSGGEQQRVAIARALV--VNPKILLLD-----  154 (235)
T ss_pred             --------HHHH-HHHCCCCHHHHHHHHHHHHHHCC-CHHHHHCCHHHCCHHHHHHHHHHHHHH--CCCCEEEEE-----
T ss_conf             --------9999-98769999999999999998779-977874894458999999999999997--389989992-----


Q ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHCCEEEEEEC
Q ss_conf             5664432113788999999999999882791999771382201689999840101432422331387889725
Q gi|254780332|r  356 TTSKKIEENRVLEITGITMALKALAKELNIPIIALSQLSRQVENRDNKRPQLSDLRESGSIEQDADVVLFVIR  428 (504)
Q Consensus       356 ~~~~~~~~~r~~~i~~is~~lK~lA~e~~ipvi~lsQLnR~~e~r~~krP~lsDLr~Sg~IEqdAD~v~~l~R  428 (504)
T Consensus       155 EP~s~-LD~--~~~~~i~~~l~~l~~~~~~T~i~vTH----------------d~---~~a~~~aDri~vl~~  205 (235)
T cd03299         155 EPFSA-LDV--RTKEKLREELKKIRKEFGVTVLHVTH----------------DF---EEAWALADKVAIMLN  205 (235)
T ss_pred             CCCCC-CCH--HHHHHHHHHHHHHHHHHCCEEEEECC----------------CH---HHHHHHCCEEEEEEC
T ss_conf             88764-699--99999999999999982999999878----------------99---999996999999989