HHsearch alignment for GI: 254780332 and conserved domain: smart00382

>smart00382 AAA ATPases associated with a variety of cellular activities. AAA - ATPases associated with a variety of cellular activities. This profile/alignment only detects a fraction of this vast family. The poorly conserved N-terminal helix is missing from the alignment.
Probab=97.64  E-value=0.00043  Score=50.61  Aligned_cols=125  Identities=26%  Similarity=0.303  Sum_probs=69.5

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCC
Q ss_conf             77267762131002769999999999851011123333321247975899958521799987899998741011000121
Q gi|254780332|r  218 RSDLIIIAGRPGMGKTSLATNIAYNVADAYKAELQTDGSYKTINGGIVGFYSLEMSSEQLATRIISEQTEVPSSKIRRGE  297 (504)
Q Consensus       218 ~G~l~Viaarpg~GKTalalniA~~~A~~~~~~~~~~~~~~~~~g~~Vl~fSlEMs~~el~~R~is~~s~I~~~~i~~g~  297 (504)
T Consensus         1 ~~~~ill~G~~GsGKTtl~~~la~~~~~---------------~~~~v~~~~~~~~~~~~~~~~~---------------   50 (148)
T smart00382        1 PGEVILIVGPPGSGKTTLARALARELGP---------------PGGGVIYIDGEDILEEVLDQLL---------------   50 (148)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHHHCC---------------CCCCEEEEEHHHHHHHHHHHHH---------------
T ss_conf             9978999999970299999999987266---------------8996899875998988898765---------------


Q ss_pred             CCHHHHHHHHHHHHHHHHCCEEEECCCCCCHHHHHHHHHHHCCCCCCCEEEECCHHHCCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf             37688998999999986278078258998899999988640224447467767135325664432113788999999999
Q gi|254780332|r  298 LTRPDYEKIVACSQVMQKLPLYIDQTGGISMSQLATRARRLKRQRGLDLLIVDYIQLMTTSKKIEENRVLEITGITMALK  377 (504)
Q Consensus       298 l~~~e~~~i~~a~~~l~~~~l~I~d~~~~ti~~I~~~~r~~~~~~gi~~vvIDYLqli~~~~~~~~~r~~~i~~is~~lK  377 (504)
T Consensus        51 -----------------~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~viiiDei~~~~~~~~~~---~~~~~~~~~~~~  109 (148)
T smart00382       51 -----------------LIIVGGKKASGSGELRLR-LALALARKLKPDVLILDEITSLLDAEQEA---LLLLLEELRLLL  109 (148)
T ss_pred             -----------------HHHHCCCCCCCCHHHHHH-HHHHHHHHCCCCEEEEECCHHHCCCCCHH---HHHHHHHHHHHC
T ss_conf             -----------------300011221051999999-99999984499899982750214762079---999999999851


Q ss_pred             HHHHHHCCCEEEEEEC
Q ss_conf             9998827919997713
Q gi|254780332|r  378 ALAKELNIPIIALSQL  393 (504)
Q Consensus       378 ~lA~e~~ipvi~lsQL  393 (504)
T Consensus       110 ~~~~~~~~~vi~~~n~  125 (148)
T smart00382      110 LLKSEKNLTVILTTND  125 (148)
T ss_pred             CCCCCCCEEEEEEECC
T ss_conf             7657899899995699