RPSBLAST alignment for GI: 254780332 and conserved domain: cd01121

>gnl|CDD|29987 cd01121, Sms, Sms (bacterial radA) DNA repair protein. This protein is not related to archael radA any more than is to other RecA-like NTPases. Sms has a role in recombination and recombinational repair and is responsible for the stabilization or processing of branched DNA molecules.. Length = 372

 Score = 41.8 bits (98), Expect = 5e-04
 Identities = 58/288 (20%), Positives = 109/288 (37%), Gaps = 71/288 (24%)

Query: 202 VSTGIQTLDKQM-GGLQRSDLIIIAGRPGMGKTSLATNIAYNVADAYKAELQTDGSYKTI 260
           + TGI+ LD+ + GGL    +I+I G PG+GK++L   +A  +A      L   G     
Sbjct: 64  IPTGIEELDRVLGGGLVPGSVILIGGDPGIGKSTLLLQVAARLAKRGGKVLYVSG----- 118

Query: 261 NGGIVGFYSLEMSSEQLATRIISEQTEVPSSKIRRGELTRPDYEKIVACSQVMQKLPLYI 320
                     E S EQ+  R              R  ++  +               LY+
Sbjct: 119 ----------EESPEQIKLR------------ADRLGISTEN---------------LYL 141

Query: 321 DQTGGISMSQLATRARRLKRQRGLDLLIVDYIQLMTTSK-KIEENRVLEITGITMALKAL 379
                 ++  +      LK     DL+I+D IQ + +S+       V ++   T  L   
Sbjct: 142 --LAETNLEDILASIEELK----PDLVIIDSIQTVYSSELTSAPGSVSQVRECTAELMRF 195

Query: 380 AKELNIPIIALSQLSRQVENRDNKRPQLSDLRESGSIEQDADVVLFVIRDEYY------- 432
           AKE NIPI  +  ++++             +     +E   D VL+   D +        
Sbjct: 196 AKERNIPIFIVGHVTKE-----------GSIAGPKVLEHMVDTVLYFEGDRHSEYRILRS 244

Query: 433 IRNK-EPTNKDDILAYTKWQEDLKRVKGIADIIIAKQRHGPTGTVTLA 479
           ++N+   TN  ++  +   +  L+ V   +++ ++++     G+    
Sbjct: 245 VKNRFGSTN--ELGVFEMRENGLREVSNPSELFLSEREEDVPGSAVTV 290