HHsearch alignment for GI: 254780333 and conserved domain: PRK11165
>PRK11165 diaminopimelate decarboxylase; Provisional.
Probab=99.30 E-value=2.4e-08 Score=73.77 Aligned_cols=320 Identities=13% Similarity=0.082 Sum_probs=171.5
Q ss_pred EEEEEEHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCHHHHHHHHHHCCCCEEEECCHHHHHHHHHHCCCC-----CEE
Q ss_conf 099986889999999998628997599999328665798999999998799899985599999999838985-----267
Q gi|254780333|r 7 LRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVKLRLYTPQA-----RIF 81 (370)
Q Consensus 7 ~~leIdl~al~~Ni~~i~~~~~~~~i~aVVKanAYGhG~~~va~~l~~~Gv~~faVa~~~EA~~lR~~g~~~-----~Il 81 (370)
T Consensus 19 P~yVyd~~~i~~~~~~l~~~~---~i~YAvKAN~----~~~il~~l~~~G~g-~DvaS~gEl~~al~aG~~~~~~~~~Ii 90 (412)
T PRK11165 19 PVWVYDADIIRRQIAQLKQFD---VIRFAQKACS----NIHILRLMREQGVK-VDAVSLGEIERALAAGYSPGTEPDDIV 90 (412)
T ss_pred CEEEEEHHHHHHHHHHHHCCC---CEEEEHHHCC----CHHHHHHHHHCCCC-EEEECHHHHHHHHHCCCCCCCCCCCEE
T ss_conf 879986999999999862668---2488626488----89999999984996-688799999999975999899855238
Q ss_pred EECCC-CHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCEEEECCCC--------------CCCCCCHHHHHHHH
Q ss_conf 30689-7469888875421013489989999888876088776167612666--------------76556988999999
Q gi|254780333|r 82 VLYGI-HPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQVDTGF--------------NRLGLSLQEALDFT 146 (370)
Q Consensus 82 vl~~~-~~~~~~~~~~~~i~~~i~s~~~l~~l~~~~~~~~~~~vhlkiDTGM--------------~R~G~~~~e~~~~~ 146 (370)
T Consensus 91 f~g~~k~~~~l~~a~~~gv~in~ds~~eL~~i~~~---~~~~~V~lRiNP~~~~~~~~~~~tg~~~sKFGi~~~~~~~~~ 167 (412)
T PRK11165 91 FTADLIDRATLARVSELKIPVNAGSIDMLDQLGQV---SPGHRVWLRINPGFGHGHSQKTNTGGENSKHGIWHEDLPAAL 167 (412)
T ss_pred ECCCCCCHHHHHHHHHCCCEEECCCHHHHHHHHHH---CCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH
T ss_conf 77865799999999984997822878999999864---668846999568868776643346887555678999999999
Q ss_pred HHHHHHHCCCHHHHHCCCCCCCCCCCHHHHHH-HHHHHHHHHHHCCCCHHHCCCCHHCC--C--CCCCCHH---------
Q ss_conf 88886310001243201243333466788999-99999997543488601116411004--7--7322202---------
Q gi|254780333|r 147 HNSFNKKLGQLSLIISHLACADDPSSHVNSVQ-LERFRTLISHYKGIEASLASSSGILL--G--PNYHFQL--------- 212 (370)
Q Consensus 147 ~~~~~~~~~~i~gi~THfa~ad~~~~~~~~~Q-~~~F~~~~~~~~~~~~h~~nS~~~l~--~--p~~~~d~--------- 212 (370)
T Consensus 168 ~~~~~~-~l~~~GlH~HiGS~--i~~~-~~~~~~~~~~~~~~~~-g~~~~~idiGGGfgv~Y~~~~~~~d~~~~~~~~~~ 242 (412)
T PRK11165 168 AVIQRY-GLKLVGIHMHIGSG--VDYG-HLEQVCGAMVRQVIEL-GQDIEAISAGGGLSIPYRSGEEPVDTEHYFGLWNA 242 (412)
T ss_pred HHHHHC-CCCEEEEEEECCCC--CCHH-HHHHHHHHHHHHHHHH-CCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHH
T ss_conf 999867-99789888953888--7769-9999999999999980-88731576158666478889889899999999999
Q ss_pred HCCCCCC-CCCCC----CCCCCCCCCCEEEEEEEEEEEEEECCCCCCCCCCCCCCCCCCEEEEECCCCCCCEECCCCCCC
Q ss_conf 0487353-06787----767556764100123688632671489834665653467764179712330026010236854
Q gi|254780333|r 213 TRPGISL-YGGTD----KINKSHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLD 287 (370)
Q Consensus 213 vR~Gi~l-YG~~~----~~~~~~~l~pv~~l~s~i~~ir~l~~G~~VgYg~~~~~~~~~~iavipiGYaDG~pr~ls~~~ 287 (370)
T Consensus 243 ~~~~i~~~~~~~~~l~iEPGR~-lva~aG~llt~V~~~K~~~---------------~~~~~~vD~Gmn~l~rpalyg-- 304 (412)
T PRK11165 243 ARKQIARHLGHPVKLEIEPGRF-LVAESGVLVTQVRAVKQMG---------------SRHFVLVDAGFNDLMRPAMYG-- 304 (412)
T ss_pred HHHHHHHHCCCCCEEEECCCCE-EECCCCEEEEEEEEEEECC---------------CCCEEEECCCHHCCCCCHHCC--
T ss_conf 9999998529984699825726-7315528999999999728---------------765899725420154302213--
Q ss_pred CCCCCCCC-CCCEEEEC--CEEEEEEEECCCC--CEEEE------CCCCCCCCCCCEEEEECCCCCHHHHHHHHCCCC--
Q ss_conf 33444323-28869999--9995077004256--47996------688778788878999788889989999817946--
Q gi|254780333|r 288 SEHSPSVF-LGGKGFIK--GYMVPILGKITMD--MTMFD------ITDSLSIEVGDYIQIFGPDIKLDDVALASGTTN-- 354 (370)
Q Consensus 288 ~~~~~~~~-~~~~vli~--G~~~pivGrv~MD--~~~vd------vt~~~~~~~GD~V~l~G~~i~~~~~A~~~gti~-- 354 (370)
T Consensus 305 a~h~i~~~~~~~~~~~~~~~~~~~v~Gp~Ces~D~l~~~~~~~i~~~~LP~l~~GD~l~i~~~GAY~~smss~yN~rp~p 384 (412)
T PRK11165 305 SYHHISVLAADGRSLEHAPLVETVVAGPLCESGDVFTQQEGGVVETRALPQVKVGDYLVLHDTGAYGASMSSNYNSRPLL 384 (412)
T ss_pred CCCEEEEECCCCCCCCCCCCCEEEEECCCCCCCCEECCCCCCCCCCCCCCCCCCCCEEEECCCCCCHHHHHCCCCCCCCC
T ss_conf 45426882566777656875568988679886243343666531444488899989999916881617660212599988
Q ss_pred EEEECC
Q ss_conf 042154
Q gi|254780333|r 355 YDLLVR 360 (370)
Q Consensus 355 yEil~~ 360 (370)
T Consensus 385 aeVlv~ 390 (412)
T PRK11165 385 PEVLFD 390 (412)
T ss_pred CEEEEE
T ss_conf 089999