HHsearch alignment for GI: 254780333 and conserved domain: cd06829
>cd06829 PLPDE_III_CANSDC Type III Pyridoxal 5-phosphate (PLP)-Dependent Enzyme Carboxynorspermidine Decarboxylase. Carboxynorspermidine decarboxylase (CANSDC) catalyzes the decarboxylation of carboxynorspermidine, the last step in the biosynthesis of norspermidine. It is homologous to eukaryotic ornithine decarboxylase (ODC) and diaminopimelate decarboxylase (DapDC), which are fold type III PLP-dependent enzymes that contain an N-terminal PLP-binding TIM-barrel domain and a C-terminal beta-sandwich domain, similar to bacterial alanine racemases. Based on this similarity, CANSDC may require homodimer formation and the presence of the PLP cofactor for its catalytic activity.
Probab=99.39 E-value=3.4e-09 Score=79.25 Aligned_cols=293 Identities=15% Similarity=0.122 Sum_probs=154.0
Q ss_pred EEEEEHHHHHHHHHHHHHHC--CCCEEEEEEECCCCCCCHHHHHHHHHHCCCCEEEECCHHHHHHHHHHCCCCCEEEECC
Q ss_conf 99986889999999998628--9975999993286657989999999987998999855999999998389852673068
Q gi|254780333|r 8 RLKIDLTALKNNWHSMNALS--GNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVKLRLYTPQARIFVLYG 85 (370)
Q Consensus 8 ~leIdl~al~~Ni~~i~~~~--~~~~i~aVVKanAYGhG~~~va~~l~~~Gv~~faVa~~~EA~~lR~~g~~~~Ilvl~~ 85 (370)
T Consensus 3 ~YVyd~~~i~~n~~~~~~~~~~~~~~i~YA~KAN~----~~~il~~l~~~g-~G~d~~S~~E~~la~~~~-~~~~~~~~~ 76 (346)
T cd06829 3 CYVLDEAKLRRNLEILKRVQERSGAKILLALKAFS----MWSVFPLIREYL-DGTTASSLFEARLGREEF-GGEVHTYSP 76 (346)
T ss_pred EEEEEHHHHHHHHHHHHHHHHCCCCEEEEEEHHCC----CHHHHHHHHHHC-CEEEECCHHHHHHHHHHC-CCCCEEECC
T ss_conf 99975999999999999977338987999882428----889999999749-969974999999974106-876467568
Q ss_pred C-CHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCEEEECCCC--------------CCCCCCHHHHHHHHHHHH
Q ss_conf 9-7469888875421013489989999888876088776167612666--------------765569889999998888
Q gi|254780333|r 86 I-HPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQVDTGF--------------NRLGLSLQEALDFTHNSF 150 (370)
Q Consensus 86 ~-~~~~~~~~~~~~i~~~i~s~~~l~~l~~~~~~~~~~~vhlkiDTGM--------------~R~G~~~~e~~~~~~~~~ 150 (370)
T Consensus 77 ~~~~~el~~~~~~~~~i~~ds~~El~~i~~~~~-~~~~~V~lRINP~~~~~~~~~~~tg~~~sKFGi~~~~~~~~~~~-- 153 (346)
T cd06829 77 AYRDDEIDEILRLADHIIFNSLSQLERFKDRAK-AAGISVGLRINPEYSEVETDLYDPCAPGSRLGVTLDELEEEDLD-- 153 (346)
T ss_pred CCCHHHHHHHHHCCCEEEECCHHHHHHHHHHHC-CCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH--
T ss_conf 799899999997299899889999999998740-58974999985898777676605789844037879998787773--
Q ss_pred HHHCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHH-HCC--CCHHHCCCCHHCC--CCCCCCHH----HCCCCCCCC
Q ss_conf 63100012432012433334667889999999999754-348--8601116411004--77322202----048735306
Q gi|254780333|r 151 NKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLISH-YKG--IEASLASSSGILL--GPNYHFQL----TRPGISLYG 221 (370)
Q Consensus 151 ~~~~~~i~gi~THfa~ad~~~~~~~~~Q~~~F~~~~~~-~~~--~~~h~~nS~~~l~--~p~~~~d~----vR~Gi~lYG 221 (370)
T Consensus 154 -----~i~Glh~H~~~--~~~~----~~~~~~~~~i~~~~~~~~~~l~~id~GGG~~i~~~~~d~~~~~~~i~~~~~~~~ 222 (346)
T cd06829 154 -----GIEGLHFHTLC--EQDF----DALERTLEAVEERFGEYLPQLKWLNLGGGHHITRPDYDVDRLIALIKRFKEKYG 222 (346)
T ss_pred -----CCCEEEEEECC--CCCH----HHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCC
T ss_conf -----58614776336--7569----999999999999999752101445513776667888799999999999997639
Q ss_pred CC--CCCCCCCCCCCEEEEEEEEEEEEEECCCCCCCCCCCCCCCCCCEEEEECCCCCCCEECCCCCCCCCCCCCCCCCCE
Q ss_conf 78--7767556764100123688632671489834665653467764179712330026010236854334443232886
Q gi|254780333|r 222 GT--DKINKSHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGK 299 (370)
Q Consensus 222 ~~--~~~~~~~~l~pv~~l~s~i~~ir~l~~G~~VgYg~~~~~~~~~~iavipiGYaDG~pr~ls~~~~~~~~~~~~~~~ 299 (370)
T Consensus 223 ~~liiEPGR~l-Va~aG~llt~V~~ik~--~g--------------~~~~i~D~g~~~~~~~~~-~~--~~~p~~~~~~~ 282 (346)
T cd06829 223 VEVYLEPGEAV-ALNTGYLVATVLDIVE--NG--------------MPIAILDASATAHMPDVL-EM--PYRPPIRGAGE 282 (346)
T ss_pred CCEEECCCHHH-HHCCEEEEEEEEEEEE--CC--------------EEEEEEECCCCCCCCHHH-CC--CCCHHHHCCCC
T ss_conf 73685363400-4353579999999950--97--------------789998362103761555-14--65423304788
Q ss_pred EEECCEEEEEEEECCCCCEEE-ECCCCCCCCCCCEEEEECCC
Q ss_conf 999999950770042564799-66887787888789997888
Q gi|254780333|r 300 GFIKGYMVPILGKITMDMTMF-DITDSLSIEVGDYIQIFGPD 340 (370)
Q Consensus 300 vli~G~~~pivGrv~MD~~~v-dvt~~~~~~~GD~V~l~G~~ 340 (370)
T Consensus 283 ~~~~~~~~~v~Gp~Ces~Dvl~~~~~~~~l~~GD~l~i~~~G 324 (346)
T cd06829 283 PGEGAHTYRLGGNSCLAGDVIGDYSFDEPLQVGDRLVFEDMA 324 (346)
T ss_pred CCCCCCEEEEECCCCCCCCEECCCCCCCCCCCCCEEEECCCC
T ss_conf 878884699987898886788866688899999999991575