HHsearch alignment for GI: 254780333 and conserved domain: cd06840
>cd06840 PLPDE_III_Bif_AspK_DapDC Type III Pyridoxal 5-phosphate (PLP)-Dependent Enzyme Bifunctional Aspartate Kinase/Diaminopimelate Decarboxylase. Bifunctional aspartate kinase/diaminopimelate decarboxylase (AspK/DapDC, EC 4.1.1.20/EC 2.7.2.4) typically exists in bacteria. These proteins contain an N-terminal AspK region and a C-terminal DapDC region, which contains a PLP-binding TIM-barrel domain followed by beta-sandwich domain, characteristic of fold type III PLP-dependent enzymes. Members of this subfamily have not been fully characterized. Based on their sequence, these proteins may catalyze both reactions catalyzed by AspK and DapDC. AspK catalyzes the phosphorylation of L-aspartate to produce 4-phospho-L-aspartate while DapDC participates in the last step of lysine biosynthesis, the conversion of meso-2,6-diaminoheptanedioate to L-lysine.
Probab=99.62 E-value=3.1e-12 Score=98.93 Aligned_cols=302 Identities=15% Similarity=0.094 Sum_probs=171.9
Q ss_pred EEEEEEHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCHHHHHHHHHHCCCCEEEECCHHHHHHHHHH--CCCCCEEEEC
Q ss_conf 09998688999999999862899759999932866579899999999879989998559999999983--8985267306
Q gi|254780333|r 7 LRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVKLRLY--TPQARIFVLY 84 (370)
Q Consensus 7 ~~leIdl~al~~Ni~~i~~~~~~~~i~aVVKanAYGhG~~~va~~l~~~Gv~~faVa~~~EA~~lR~~--g~~~~Ilvl~ 84 (370)
T Consensus 13 P~yVyd~~~i~~~~~~~~~~~~~~~~~YAvKaN~----~~~vl~~l~~~G~-g~dvaS~~El~~al~~~~G~~~~~Iv~~ 87 (368)
T cd06840 13 PCYVYDLETVRARARQVSALKAVDSLFYAIKANP----HPDVLRTLEEAGL-GFECVSIGELDLVLKLFPDLDPRRVLFT 87 (368)
T ss_pred CEEEEEHHHHHHHHHHHHHCCCCCCEEEEEECCC----CHHHHHHHHHCCC-CEEEECHHHHHHHHHHHCCCCHHHEEEC
T ss_conf 8899879999999999972578781899970489----9999999998199-8699899999999986469986886856
Q ss_pred CC--CHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCEEEE------------CCC--CCCCCCCHHHHHHHHHH
Q ss_conf 89--746988887542101348998999988887608877616761------------266--67655698899999988
Q gi|254780333|r 85 GI--HPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQV------------DTG--FNRLGLSLQEALDFTHN 148 (370)
Q Consensus 85 ~~--~~~~~~~~~~~~i~~~i~s~~~l~~l~~~~~~~~~~~vhlki------------DTG--M~R~G~~~~e~~~~~~~ 148 (370)
T Consensus 88 gp~K~~~~l~~A~~~gv~i~~Ds~~el~~i~~~~~---~~~v~lRinp~~~~~~~~~~~~~~~~sKFG~~~~e~~~~l~~ 164 (368)
T cd06840 88 PNFAARSEYEQALELGVNVTVDNLHPLREWPELFR---GREVILRIDPGQGEGHHKHVRTGGPESKFGLDVDELDEARDL 164 (368)
T ss_pred CCCCCHHHHHHHHHCCCEEEECCHHHHHHHHHHCC---CCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
T ss_conf 78899999999998599599888999999987525---880899982686876666420588602479987889999999
Q ss_pred HHHHHCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHCCCCHHCCCC----CCCCHHH--CCCCCCC-C
Q ss_conf 8863100012432012433334667889999999999754348860111641100477----3222020--4873530-6
Q gi|254780333|r 149 SFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLISHYKGIEASLASSSGILLGP----NYHFQLT--RPGISLY-G 221 (370)
Q Consensus 149 ~~~~~~~~i~gi~THfa~ad~~~~~~~~~Q~~~F~~~~~~~~~~~~h~~nS~~~l~~p----~~~~d~v--R~Gi~lY-G 221 (370)
T Consensus 165 ~~-~~~l~~~GlhfH~GS~~-~~~~~~~~~~~~~~~~~~~~~~--~~~ldiGGGf~~~y~~~~~~~~~~~~~~~l~~~~~ 240 (368)
T cd06840 165 AK-KAGIIVIGLHAHSGSGV-EDTDHWARHGDYLASLARHFPA--VRILNVGGGLGIPEAPGGRPIDLDALDAALAAAKA 240 (368)
T ss_pred HH-HCCCCEEEEEEECCCCC-CCHHHHHHHHHHHHHHHHHCCC--CCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHH
T ss_conf 98-57993899998678777-8989999999999999973655--23476447657478888886489999999999986
Q ss_pred CCC------CCCCCCCCCCEEEEEEEEEEEEEECCCCCCCCCCCCCCCCCCEEEEECCCCCCCEECCCCCCCCCCCCCCC
Q ss_conf 787------76755676410012368863267148983466565346776417971233002601023685433444323
Q gi|254780333|r 222 GTD------KINKSHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVF 295 (370)
Q Consensus 222 ~~~------~~~~~~~l~pv~~l~s~i~~ir~l~~G~~VgYg~~~~~~~~~~iavipiGYaDG~pr~ls~~~~~~~~~~~ 295 (370)
T Consensus 241 ~~~~~~l~~EPGR~l-va~ag~lvt~V~~~k~~~~---------------~~~~~~d~G~~~~~~~~~~~--~~~~~~~~ 302 (368)
T cd06840 241 AHPQYQLWMEPGRFI-VAESGVLLARVTQIKHKDG---------------VRFVGLETGMNSLIRPALYG--AYHEIVNL 302 (368)
T ss_pred HCCCCEEEECCCHHH-HCCCEEEEEEEEEEEECCC---------------CEEEEECCCCCCCCCHHHCC--CCCCEEEC
T ss_conf 489978998147013-2275179999999986388---------------32899887634556767706--55502534
Q ss_pred CCCEEEECCEEEEEEEECCCC--CEEEECCCCCCCCCCCEEEEECCC
Q ss_conf 288699999995077004256--479966887787888789997888
Q gi|254780333|r 296 LGGKGFIKGYMVPILGKITMD--MTMFDITDSLSIEVGDYIQIFGPD 340 (370)
Q Consensus 296 ~~~~vli~G~~~pivGrv~MD--~~~vdvt~~~~~~~GD~V~l~G~~ 340 (370)
T Consensus 303 -~~~~~~~~~~~~v~GptC~~~D~l~~~~~-lp~l~~GD~l~~~~~G 347 (368)
T cd06840 303 -SRLDEPPAGNADVVGPICESGDVLGRDRL-LPETEEGDVILIANAG 347 (368)
T ss_pred -CCCCCCCCEEEEEECCCCCCCCEECCCCC-CCCCCCCCEEEECCCC
T ss_conf -77888885489998379672229894631-7889999999776826