HHsearch results for GI: 254780333 and protein with PDBid: 1bd0_A
>1bd0_A Alanine racemase; isomerase, pyridoxal phosphate, alanine phosphonate; HET: IN5; 1.60A {Geobacillus stearothermophilus} SCOP: b.49.2.2 c.1.6.1 PDB: 1sft_A* 2sfp_A* 1l6g_A* 1niu_A* 1l6f_A* 1xql_A* 1xqk_A* 1epv_A* 1ftx_A*
Probab=100.00 E-value=0 Score=753.74 Aligned_cols=353 Identities=27% Similarity=0.375 Sum_probs=328.6
Q ss_pred CCCCEEEEEEHHHHHHHHHHHHHHC-CCCEEEEEEECCCCCCCHHHHHHHHHHCCCCEEEECCHHHHHHHHHHCCCCCEE
Q ss_conf 8885099986889999999998628-997599999328665798999999998799899985599999999838985267
Q gi|254780333|r 3 SNEFLRLKIDLTALKNNWHSMNALS-GNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVKLRLYTPQARIF 81 (370)
Q Consensus 3 ~~~~~~leIdl~al~~Ni~~i~~~~-~~~~i~aVVKanAYGhG~~~va~~l~~~Gv~~faVa~~~EA~~lR~~g~~~~Il 81 (370)
.+|.+|+|||+++|+||++.+|++. +++++||||||||||||+.+|++.+.++||++|||++++||++||++|++.|||
T Consensus 4 ~~r~tw~eIdl~al~~N~~~i~~~~~~~~~i~aVVKanAYGhG~~~ia~~l~~~Gv~~faVa~~~EA~~LR~~gi~~~IL 83 (388)
T 1bd0_A 4 FHRDTWAEVDLDAIYDNVENLRRLLPDDTHIMAVVKANAYGHGDVQVARTALEAGASRLAVAFLDEALALREKGIEAPIL 83 (388)
T ss_dssp CCSSEEEEEEHHHHHHHHHHHHHHSCTTCEEEEECHHHHHTTCHHHHHHHHHHHTCCEEEESSHHHHHHHHHTTCCSCEE
T ss_pred CCCCEEEEEEHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCHHHHHHHHHHCCCCEEEEEEHHHHHHHHHCCCCCCEE
T ss_conf 78878999969999999999997489989799999150264888999999998698999986799999999708998589
Q ss_pred EECCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCHHHH-HHHHHHHHHHHCCCHHHH
Q ss_conf 3068974698888754210134899899998888760887761676126667655698899-999988886310001243
Q gi|254780333|r 82 VLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQVDTGFNRLGLSLQEA-LDFTHNSFNKKLGQLSLI 160 (370)
Q Consensus 82 vl~~~~~~~~~~~~~~~i~~~i~s~~~l~~l~~~~~~~~~~~vhlkiDTGM~R~G~~~~e~-~~~~~~~~~~~~~~i~gi 160 (370)
+|+++.+++++.+.++++++++++.+++..++.+.+.+.++++|||+||||||+||.++|. ..+++.+...+++.++|+
T Consensus 84 vl~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~vhLkiDTGM~RlG~~~~e~~~~~~~~i~~~~~l~~~Gi 163 (388)
T 1bd0_A 84 VLGASRPADAALAAQQRIALTVFRSDWLEEASALYSGPFPIHFHLKMDTGMGRLGVKDEEETKRIVALIERHPHFVLEGL 163 (388)
T ss_dssp ECSCCCGGGHHHHHHTTEEEEECCHHHHHHHHHHCCCSSCEEEEEEBCSSSCSSSBCSHHHHHHHHHHHHHSTTEEEEEE
T ss_pred EECCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEE
T ss_conf 96178868999987326664206299999888876158863899998168886787827899999999985899616789
Q ss_pred HCCCCCCCCCCCHHHHHHHHHHHHHHHHHC--CCCHHHCCCCHHCCCCCCCCHHHCCCCCCCCCCCCCC----CCCCCCC
Q ss_conf 201243333466788999999999975434--8860111641100477322202048735306787767----5567641
Q gi|254780333|r 161 ISHLACADDPSSHVNSVQLERFRTLISHYK--GIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKIN----KSHPMQT 234 (370)
Q Consensus 161 ~THfa~ad~~~~~~~~~Q~~~F~~~~~~~~--~~~~h~~nS~~~l~~p~~~~d~vR~Gi~lYG~~~~~~----~~~~l~p 234 (370)
||||++||+++.+++..|+++|.+.++.+. ....|++||++++++|+.++||||||++|||++|... .+.+|+|
T Consensus 164 ~tH~a~ad~~~~~~~~~q~~~~~~~~~~~~~~~~~~h~anS~~~l~~~~~~~d~vR~Gi~lyG~~p~~~~~~~~~~~Lkp 243 (388)
T 1bd0_A 164 YTHFATADEVNTDYFSYQYTRFLHMLEWLPSRPPLVHCANSAASLRFPDRTFNMVRFGIAMYGLAPSPGIKPLLPYPLKE 243 (388)
T ss_dssp ECCCSSTTSSCCHHHHHHHHHHHHHHTTCSSCCSEEECCCHHHHHHCTTSCTTEEEECGGGGTCCSCGGGGGGCSSCCCC
T ss_pred EECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHCCCCCCCCCEECCEEEEECCCCCCCCCCCCCCCEE
T ss_conf 70246732235288999999999999975324540666256777539502376041336888437776655444457505
Q ss_pred EEEEEEEEEEEEEECCCCCCCCCCCCCCCCCCEEEEECCCCCCCEECCCCCCCCCCCCCCCCCCEEEECCEEEEEEEECC
Q ss_conf 00123688632671489834665653467764179712330026010236854334443232886999999950770042
Q gi|254780333|r 235 VVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYMVPILGKIT 314 (370)
Q Consensus 235 v~~l~s~i~~ir~l~~G~~VgYg~~~~~~~~~~iavipiGYaDG~pr~ls~~~~~~~~~~~~~~~vli~G~~~pivGrv~ 314 (370)
||+|+|+|+++|++++|++||||++|++++|++|||+|+||||||||.++| ++|+|+|++|||+||||
T Consensus 244 v~~l~a~ii~i~~~~~G~~VgYg~~~~a~~~~~ia~v~iGYaDG~~r~~~~------------~~V~i~g~~~pivGrvs 311 (388)
T 1bd0_A 244 AFSLHSRLVHVKKLQPGEKVSYGATYTAQTEEWIGTIPIGYADGWLRRLQH------------FHVLVDGQKAPIVGRIC 311 (388)
T ss_dssp CEEEEEECSEEEEECTTCEESGGGCEECCSSEEEEEESCCGGGTCCGGGGG------------CEEEETTEEEEEESCCC
T ss_pred EEEEEEEEEEEEEECCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCC------------CEEEECCEEEEEEEEEE
T ss_conf 799999733677757998455575201577835999821402563201479------------88999999805862871
Q ss_pred CCCEEEECCCCCCCCCCCEEEEECCC----CCHHHHHHHHCCCCEEEECCCCCCCCCCC
Q ss_conf 56479966887787888789997888----89989999817946042154888736445
Q gi|254780333|r 315 MDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALASGTTNYDLLVRIGTRYAKFY 369 (370)
Q Consensus 315 MD~~~vdvt~~~~~~~GD~V~l~G~~----i~~~~~A~~~gti~yEil~~i~~RvpRiY 369 (370)
|||+|||+|+ ++++||+|+|||++ +|++++|+++|||+||++|+|++|+||+|
T Consensus 312 MD~~~vDv~~--~~~vGD~V~l~G~~~~~~i~~~~~a~~~~ti~yEil~~l~~Rv~R~Y 368 (388)
T 1bd0_A 312 MDQCMIRLPG--PLPVGTKVTLIGRQGDEVISIDDVARHLETINYEVPCTISYRVPRIF 368 (388)
T ss_dssp SSCEEEECSS--CCCTTCEEEEEEEETTEEECHHHHHHHHTSCTTHHHHHSCTTSCEEE
T ss_pred CCEEEEECCC--CCCCCCEEEEECCCCCCCCCHHHHHHHHCCCCCHHHHCCCCCCCEEE
T ss_conf 3718998899--99999999998689987618999999868971347508788787499