HHsearch results for GI: 254780333 and protein with PDBid: 1bd0_A

>1bd0_A Alanine racemase; isomerase, pyridoxal phosphate, alanine phosphonate; HET: IN5; 1.60A {Geobacillus stearothermophilus} SCOP: b.49.2.2 c.1.6.1 PDB: 1sft_A* 2sfp_A* 1l6g_A* 1niu_A* 1l6f_A* 1xql_A* 1xqk_A* 1epv_A* 1ftx_A*
Probab=100.00  E-value=0  Score=753.74  Aligned_cols=353  Identities=27%  Similarity=0.375  Sum_probs=328.6

Q ss_pred             CCCCEEEEEEHHHHHHHHHHHHHHC-CCCEEEEEEECCCCCCCHHHHHHHHHHCCCCEEEECCHHHHHHHHHHCCCCCEE
Q ss_conf             8885099986889999999998628-997599999328665798999999998799899985599999999838985267
Q gi|254780333|r    3 SNEFLRLKIDLTALKNNWHSMNALS-GNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVKLRLYTPQARIF   81 (370)
Q Consensus         3 ~~~~~~leIdl~al~~Ni~~i~~~~-~~~~i~aVVKanAYGhG~~~va~~l~~~Gv~~faVa~~~EA~~lR~~g~~~~Il   81 (370)
                      .+|.+|+|||+++|+||++.+|++. +++++||||||||||||+.+|++.+.++||++|||++++||++||++|++.|||
T Consensus         4 ~~r~tw~eIdl~al~~N~~~i~~~~~~~~~i~aVVKanAYGhG~~~ia~~l~~~Gv~~faVa~~~EA~~LR~~gi~~~IL   83 (388)
T 1bd0_A            4 FHRDTWAEVDLDAIYDNVENLRRLLPDDTHIMAVVKANAYGHGDVQVARTALEAGASRLAVAFLDEALALREKGIEAPIL   83 (388)
T ss_dssp             CCSSEEEEEEHHHHHHHHHHHHHHSCTTCEEEEECHHHHHTTCHHHHHHHHHHHTCCEEEESSHHHHHHHHHTTCCSCEE
T ss_pred             CCCCEEEEEEHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCHHHHHHHHHHCCCCEEEEEEHHHHHHHHHCCCCCCEE
T ss_conf             78878999969999999999997489989799999150264888999999998698999986799999999708998589


Q ss_pred             EECCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCHHHH-HHHHHHHHHHHCCCHHHH
Q ss_conf             3068974698888754210134899899998888760887761676126667655698899-999988886310001243
Q gi|254780333|r   82 VLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQVDTGFNRLGLSLQEA-LDFTHNSFNKKLGQLSLI  160 (370)
Q Consensus        82 vl~~~~~~~~~~~~~~~i~~~i~s~~~l~~l~~~~~~~~~~~vhlkiDTGM~R~G~~~~e~-~~~~~~~~~~~~~~i~gi  160 (370)
                      +|+++.+++++.+.++++++++++.+++..++.+.+.+.++++|||+||||||+||.++|. ..+++.+...+++.++|+
T Consensus        84 vl~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~vhLkiDTGM~RlG~~~~e~~~~~~~~i~~~~~l~~~Gi  163 (388)
T 1bd0_A           84 VLGASRPADAALAAQQRIALTVFRSDWLEEASALYSGPFPIHFHLKMDTGMGRLGVKDEEETKRIVALIERHPHFVLEGL  163 (388)
T ss_dssp             ECSCCCGGGHHHHHHTTEEEEECCHHHHHHHHHHCCCSSCEEEEEEBCSSSCSSSBCSHHHHHHHHHHHHHSTTEEEEEE
T ss_pred             EECCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEE
T ss_conf             96178868999987326664206299999888876158863899998168886787827899999999985899616789


Q ss_pred             HCCCCCCCCCCCHHHHHHHHHHHHHHHHHC--CCCHHHCCCCHHCCCCCCCCHHHCCCCCCCCCCCCCC----CCCCCCC
Q ss_conf             201243333466788999999999975434--8860111641100477322202048735306787767----5567641
Q gi|254780333|r  161 ISHLACADDPSSHVNSVQLERFRTLISHYK--GIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKIN----KSHPMQT  234 (370)
Q Consensus       161 ~THfa~ad~~~~~~~~~Q~~~F~~~~~~~~--~~~~h~~nS~~~l~~p~~~~d~vR~Gi~lYG~~~~~~----~~~~l~p  234 (370)
                      ||||++||+++.+++..|+++|.+.++.+.  ....|++||++++++|+.++||||||++|||++|...    .+.+|+|
T Consensus       164 ~tH~a~ad~~~~~~~~~q~~~~~~~~~~~~~~~~~~h~anS~~~l~~~~~~~d~vR~Gi~lyG~~p~~~~~~~~~~~Lkp  243 (388)
T 1bd0_A          164 YTHFATADEVNTDYFSYQYTRFLHMLEWLPSRPPLVHCANSAASLRFPDRTFNMVRFGIAMYGLAPSPGIKPLLPYPLKE  243 (388)
T ss_dssp             ECCCSSTTSSCCHHHHHHHHHHHHHHTTCSSCCSEEECCCHHHHHHCTTSCTTEEEECGGGGTCCSCGGGGGGCSSCCCC
T ss_pred             EECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHCCCCCCCCCEECCEEEEECCCCCCCCCCCCCCCEE
T ss_conf             70246732235288999999999999975324540666256777539502376041336888437776655444457505


Q ss_pred             EEEEEEEEEEEEEECCCCCCCCCCCCCCCCCCEEEEECCCCCCCEECCCCCCCCCCCCCCCCCCEEEECCEEEEEEEECC
Q ss_conf             00123688632671489834665653467764179712330026010236854334443232886999999950770042
Q gi|254780333|r  235 VVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYMVPILGKIT  314 (370)
Q Consensus       235 v~~l~s~i~~ir~l~~G~~VgYg~~~~~~~~~~iavipiGYaDG~pr~ls~~~~~~~~~~~~~~~vli~G~~~pivGrv~  314 (370)
                      ||+|+|+|+++|++++|++||||++|++++|++|||+|+||||||||.++|            ++|+|+|++|||+||||
T Consensus       244 v~~l~a~ii~i~~~~~G~~VgYg~~~~a~~~~~ia~v~iGYaDG~~r~~~~------------~~V~i~g~~~pivGrvs  311 (388)
T 1bd0_A          244 AFSLHSRLVHVKKLQPGEKVSYGATYTAQTEEWIGTIPIGYADGWLRRLQH------------FHVLVDGQKAPIVGRIC  311 (388)
T ss_dssp             CEEEEEECSEEEEECTTCEESGGGCEECCSSEEEEEESCCGGGTCCGGGGG------------CEEEETTEEEEEESCCC
T ss_pred             EEEEEEEEEEEEEECCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCC------------CEEEECCEEEEEEEEEE
T ss_conf             799999733677757998455575201577835999821402563201479------------88999999805862871


Q ss_pred             CCCEEEECCCCCCCCCCCEEEEECCC----CCHHHHHHHHCCCCEEEECCCCCCCCCCC
Q ss_conf             56479966887787888789997888----89989999817946042154888736445
Q gi|254780333|r  315 MDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALASGTTNYDLLVRIGTRYAKFY  369 (370)
Q Consensus       315 MD~~~vdvt~~~~~~~GD~V~l~G~~----i~~~~~A~~~gti~yEil~~i~~RvpRiY  369 (370)
                      |||+|||+|+  ++++||+|+|||++    +|++++|+++|||+||++|+|++|+||+|
T Consensus       312 MD~~~vDv~~--~~~vGD~V~l~G~~~~~~i~~~~~a~~~~ti~yEil~~l~~Rv~R~Y  368 (388)
T 1bd0_A          312 MDQCMIRLPG--PLPVGTKVTLIGRQGDEVISIDDVARHLETINYEVPCTISYRVPRIF  368 (388)
T ss_dssp             SSCEEEECSS--CCCTTCEEEEEEEETTEEECHHHHHHHHTSCTTHHHHHSCTTSCEEE
T ss_pred             CCEEEEECCC--CCCCCCEEEEECCCCCCCCCHHHHHHHHCCCCCHHHHCCCCCCCEEE
T ss_conf             3718998899--99999999998689987618999999868971347508788787499