HHsearch results for GI: 254780333 and protein with PDBid: 1f3t_A
>1f3t_A ODC, ornithine decarboxylase; beta-alpha-barrel, modified greek KEY beta-sheet, lyase; HET: PLP; 2.00A {Trypanosoma brucei} SCOP: b.49.2.3 c.1.6.1 PDB: 1qu4_A* 1szr_C* 2tod_A* 1njj_A*
Probab=99.63 E-value=1.1e-12 Score=100.36 Aligned_cols=319 Identities=11% Similarity=0.073 Sum_probs=183.9
Q ss_pred EEEEEEHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCHHHHHHHHHHCCCCEEEECCHHHHHHHHHHCCCCCEEEECCC
Q ss_conf 09998688999999999862899759999932866579899999999879989998559999999983898526730689
Q gi|254780333|r 7 LRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVKLRLYTPQARIFVLYGI 86 (370)
Q Consensus 7 ~~leIdl~al~~Ni~~i~~~~~~~~i~aVVKanAYGhG~~~va~~l~~~Gv~~faVa~~~EA~~lR~~g~~~~Ilvl~~~ 86 (370)
|--..|++.|++|++.+++.-|+.+++--+|||. ...+.+.+.+.|+ +|-|+|..|-...+++|++..-++++++
T Consensus 39 P~yv~d~~~i~~~~~~~~~a~p~~~~~YAvKAN~----~~~il~~l~~~G~-g~dv~S~gEl~~al~~G~~~~~Iv~~gp 113 (425)
T 1f3t_A 39 PFFVADLGDIVRKHETWKKCLPRVTPFYAVKCND----DWRVLGTLAALGT-GFDCASNTEIQRVRGIGVPPEKIIYANP 113 (425)
T ss_dssp CEEEEEHHHHHHHHHHHHHHCTTEEEEEEGGGCC----CHHHHHHHHHTTC-EEEECSHHHHHHHHHTTCCGGGEEECCS
T ss_pred CEEEEEHHHHHHHHHHHHHHCCCCEEEEEECCCC----CHHHHHHHHHCCC-EEEEECHHHHHHHHHCCCCCCEEEECCC
T ss_conf 5799589999999999998689987999863489----8999999998299-3998499999999976979674999689
Q ss_pred --CHHHHHHHHHHHH-HCCCCCHHHHHHHHHHHHCCCCCCCEEEE------CCC--CCCCCCCHHHHHHHHHHHHHHHCC
Q ss_conf --7469888875421-01348998999988887608877616761------266--676556988999999888863100
Q gi|254780333|r 87 --HPGQEKIIFDTNL-IPVISSVPQLTFYSKLMSCGVSHPYALQV------DTG--FNRLGLSLQEALDFTHNSFNKKLG 155 (370)
Q Consensus 87 --~~~~~~~~~~~~i-~~~i~s~~~l~~l~~~~~~~~~~~vhlki------DTG--M~R~G~~~~e~~~~~~~~~~~~~~ 155 (370)
.++++..+.++++ ..++.+.++++.+++... ..++.+-+ .+| ..++|+..+++.++++... ...+
T Consensus 114 ~Ks~~el~~a~~~gi~~~~~ds~~el~~i~~~~~---~~~v~~ri~~~~~~~~~~~~skFG~~~~~~~~~l~~~~-~~~l 189 (425)
T 1f3t_A 114 CKQISHIRYARDSGVDVMTFDCVDELEKVAKTHP---KAKMVLRISTDDSLARCRLSVKFGAKVEDCRFILEQAK-KLNI 189 (425)
T ss_dssp SCCHHHHHHHHHTTCCEEEECSHHHHHHHHHHCT---TCEEEEEBCC----------CCSCBCHHHHHHHHHHHH-HTTC
T ss_pred CCCHHHHHHHHHCCCEECCHHHHHHHHHHHHHCC---CCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHH-HCCC
T ss_conf 8999999999983974712788999999986445---67626785045543335577777665788899998876-3264
Q ss_pred CHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHC--CCCHHHCCCCHHCCCCC----CCCHH---HCCCCCCC-CCCCC
Q ss_conf 01243201243333466788999999999975434--88601116411004773----22202---04873530-67877
Q gi|254780333|r 156 QLSLIISHLACADDPSSHVNSVQLERFRTLISHYK--GIEASLASSSGILLGPN----YHFQL---TRPGISLY-GGTDK 225 (370)
Q Consensus 156 ~i~gi~THfa~ad~~~~~~~~~Q~~~F~~~~~~~~--~~~~h~~nS~~~l~~p~----~~~d~---vR~Gi~lY-G~~~~ 225 (370)
++.|+..|..+.-...+.+. ..++....+.+.++ +.....-|-+|-+-.+. ...++ ++.-+.-+ .....
T Consensus 190 ~l~GlH~H~gS~~~d~~~~~-~~~~~~~~~~~~~~~~g~~~~~ldiGGG~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 268 (425)
T 1f3t_A 190 DVTGVSFHVGSGSTDASTFA-QAISDSRFVFDMGTELGFNMHILDIGGGFPGTRDAPLKFEEIAGVINNALEKHFPPDLK 268 (425)
T ss_dssp EEEEEECCCCSCCSCTHHHH-HHHHHHHHHHHHHHHTTCCCCEEECCCCCCSSTTSSSCHHHHHHHHHHHHHHHSCCCTT
T ss_pred EEEEEEEECCCCCCCHHHHH-HHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCC
T ss_conf 69999988788877458899-99999999988888709952143116665766678621467888877766540145678
Q ss_pred CC--CCCC---CCCEEEEEEEEEEEEEECCCCCCCCCCCCCCCCCCEEEEECCCCCCCEECCCCCCCCCCCCCCCCCCEE
Q ss_conf 67--5567---641001236886326714898346656534677641797123300260102368543344432328869
Q gi|254780333|r 226 IN--KSHP---MQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKG 300 (370)
Q Consensus 226 ~~--~~~~---l~pv~~l~s~i~~ir~l~~G~~VgYg~~~~~~~~~~iavipiGYaDG~pr~ls~~~~~~~~~~~~~~~v 300 (370)
.. -..+ ..++..+-++|+.+|... |.....+..-..........+.-|..+.+...+-.... ....... ..
T Consensus 269 ~~li~EPGR~lva~ag~llt~V~~~K~~~-g~~~~v~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~--~~~~~~~-~~ 344 (425)
T 1f3t_A 269 LTIVAEPGRYYVASAFTLAVNVIAKKVTP-GVQTDVGAHAESNAQSFMYYVNDGVYGSFNCILYDHAV--VRPLPQR-EP 344 (425)
T ss_dssp CEEEECCSHHHHGGGEEEEEEEEEEEEC----------------CCEEEEESCCTTTGGGHHHHSCCC--CCCEECS-CC
T ss_pred CEEEEECHHHHHHEEEEEEEEEEEEEECC-CEEEEEECCCCCCCCEEEEEECCCCCCCCCHHHCCCCC--EECCCCC-CC
T ss_conf 27998150675302479999999999648-80688740334563135898415667751311125531--1013566-88
Q ss_pred EECCE--EEEEEEECC--CCCEEEECCCCCCCCCCCEEEEECCC
Q ss_conf 99999--950770042--56479966887787888789997888
Q gi|254780333|r 301 FIKGY--MVPILGKIT--MDMTMFDITDSLSIEVGDYIQIFGPD 340 (370)
Q Consensus 301 li~G~--~~pivGrv~--MD~~~vdvt~~~~~~~GD~V~l~G~~ 340 (370)
.-+++ .+-|+|.+| +|.+.-|+. .|++++||.+++..-.
T Consensus 345 ~~~~~~~~~~v~Gp~C~s~D~l~~~~~-Lp~l~~GD~l~~~~~G 387 (425)
T 1f3t_A 345 IPNEKLYPSSVWGPTCDGLDQIVERYY-LPEMQVGEWLLFEDMG 387 (425)
T ss_dssp CTTCCEEEEEEECSSSCTTCEEEEEEE-EECCCTTCEEEECSCC
T ss_pred CCCCCEEEEEEEECCCCCCCEECCCCC-CCCCCCCCEEEECCCC
T ss_conf 888877789999228787878864548-8889999999995968