HHsearch results for GI: 254780333 and protein with PDBid: 1twi_A

Probab=99.41  E-value=7.3e-10  Score=82.18  Aligned_cols=306  Identities=16%  Similarity=0.118  Sum_probs=176.7

Q ss_pred             EEEEEEHHHHHHHHHHHHHHC--------CCCEEEEEEECCCCCCCHHHHHHHHHHCCCCEEEECCHHHHHHHHHHCCCC
Q ss_conf             099986889999999998628--------997599999328665798999999998799899985599999999838985
Q gi|254780333|r    7 LRLKIDLTALKNNWHSMNALS--------GNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVKLRLYTPQA   78 (370)
Q Consensus         7 ~~leIdl~al~~Ni~~i~~~~--------~~~~i~aVVKanAYGhG~~~va~~l~~~Gv~~faVa~~~EA~~lR~~g~~~   78 (370)
                      |--.+|++.|+.|++.+++.-        ++.++.--+|||.    ...+.+.+.+.|+ +|-|+|..|-...+.+|+..
T Consensus        31 P~yv~d~~~l~~n~~~l~~af~~~~~~~g~~~~i~YAvKaN~----~~~vl~~l~~~G~-G~dvaS~~El~~al~~G~~~  105 (434)
T 1twi_A           31 PLYVMSEEQIKINYNRYIEAFKRWEEETGKEFIVAYAYKANA----NLAITRLLAKLGC-GADVVSGGELYIAKLSNVPS  105 (434)
T ss_dssp             SEEEEEHHHHHHHHHHHHHHHHHHHHHHSCCEEEEEEGGGCC----CHHHHHHHHHTTC-EEEECSHHHHHHHHHTTCCG
T ss_pred             CEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCC----CHHHHHHHHHHCC-CEEEECHHHHHHHHHCCCCC
T ss_conf             889987999999999999988776762388759999862489----9999999998499-83997899999999638998


Q ss_pred             CEEEECCC--CHHHHHHHHHHHH-HCCCCCHHHHHHHHHHH-HCCCCCCCEEEECCCC--------------CCCCCCHH
Q ss_conf             26730689--7469888875421-01348998999988887-6088776167612666--------------76556988
Q gi|254780333|r   79 RIFVLYGI--HPGQEKIIFDTNL-IPVISSVPQLTFYSKLM-SCGVSHPYALQVDTGF--------------NRLGLSLQ  140 (370)
Q Consensus        79 ~Ilvl~~~--~~~~~~~~~~~~i-~~~i~s~~~l~~l~~~~-~~~~~~~vhlkiDTGM--------------~R~G~~~~  140 (370)
                      .-++++++  .++++..+.+.++ ...+.+.++++.+.+.. +.+...++.|-++-+.              ++.|+..+
T Consensus       106 ~~Ii~~gp~k~~~~l~~a~~~gv~~~~~ds~~el~~i~~~~~~~~~~~~v~lRin~~~~~~~~~~~~~~~~~~~fg~~~~  185 (434)
T 1twi_A          106 KKIVFNGNCKTKEEIIMGIEANIRAFNVDSISELILINETAKELGETANVAFRINPNVNPKTHPKISTGLKKNKFGLDVE  185 (434)
T ss_dssp             GGEEECCSSCCHHHHHHHHHTTCSEEEECSHHHHHHHHHHHHHHTCCEEEEEEEECCCCTTTCHHHHHHHHHSSCSEEST
T ss_pred             CEEEECCCCCCHHHHHHHHHCCEEEEECHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCH
T ss_conf             71898489899999998986897067311356788999999982998628999605768776744025766555664300


Q ss_pred             H--HHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHC--CCCHHHCCCCHHCCCC---CC-----
Q ss_conf             9--9999988886310001243201243333466788999999999975434--8860111641100477---32-----
Q gi|254780333|r  141 E--ALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLISHYK--GIEASLASSSGILLGP---NY-----  208 (370)
Q Consensus       141 e--~~~~~~~~~~~~~~~i~gi~THfa~ad~~~~~~~~~Q~~~F~~~~~~~~--~~~~h~~nS~~~l~~p---~~-----  208 (370)
                      +  ...........+++++.|+..|..+... +.......+++..++...++  +.....-|=+|-+..+   +.     
T Consensus       186 ~~~~~~~~~~~~~~~~l~~~Glh~H~gs~~~-~~~~~~~~~~~~~~~~~~l~~~g~~~~~ldiGGG~~~~~~~~~~~~~~  264 (434)
T 1twi_A          186 SGIAMKAIKMALEMEYVNVVGVHCHIGSQLT-DISPFIEETRKVMDFVVELKEEGIEIEDVNLGGGLGIPYYKDKQIPTQ  264 (434)
T ss_dssp             TSHHHHHHHHHHHCSSEEEEEEECCCCSSBC-CSHHHHHHHHHHHHHHHHHHHTTCCCSEEECCCCBCCCSSSSSCCCCH
T ss_pred             HHHHHHHHHHHHHCCCCCEEEEEEEECCCCC-CCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCEEECCCCCCCCH
T ss_conf             0468999999986489972578898356534-431589999999999999998599803778747675230478888647


Q ss_pred             --CCHHHCCCCCCCCC-CC------CCCCCCCCCCEEEEEEEEEEEEEECCCCCCCCCCCCCCCCCCEEEEECCCCCCCE
Q ss_conf             --22020487353067-87------7675567641001236886326714898346656534677641797123300260
Q gi|254780333|r  209 --HFQLTRPGISLYGG-TD------KINKSHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGY  279 (370)
Q Consensus       209 --~~d~vR~Gi~lYG~-~~------~~~~~~~l~pv~~l~s~i~~ir~l~~G~~VgYg~~~~~~~~~~iavipiGYaDG~  279 (370)
                        ..+.+..-...+-. .+      +++..+ ..++..+-++|+.+|...               ..+.+++-.|..+.+
T Consensus       265 ~~~~~~~~~~~~~~~~~~~~~~l~~EPGR~l-va~ag~lvt~V~~~k~~~---------------~~~~~~~d~g~~~~~  328 (434)
T 1twi_A          265 KDLADAIINTMLKYKDKVEMPNLILEPGRSL-VATAGYLLGKVHHIKETP---------------VTKWVMIDAGMNDMM  328 (434)
T ss_dssp             HHHHHHHHHHHHTTTTTSCCCEEEECCSHHH-HGGGEEEEEEEEEEEECS---------------SCEEEEESCCTTTCC
T ss_pred             HHHHHHHHHHHHHHHCCCCCCEEEECCCCEE-EECCEEEEEEEEEEECCC---------------CEEEEEECCCCCCCC
T ss_conf             9999999988754420367867995267088-747768999999763158---------------726999815767876


Q ss_pred             ECCCCCCCCCCCCCCCCCCEEEECCEEEEEEEECCCC--CEEEECCCCCCCCCCCEEEEECCC
Q ss_conf             1023685433444323288699999995077004256--479966887787888789997888
Q gi|254780333|r  280 PLTLSGLDSEHSPSVFLGGKGFIKGYMVPILGKITMD--MTMFDITDSLSIEVGDYIQIFGPD  340 (370)
Q Consensus       280 pr~ls~~~~~~~~~~~~~~~vli~G~~~pivGrv~MD--~~~vdvt~~~~~~~GD~V~l~G~~  340 (370)
                      +..+........ ......    ....+-|.|..|+.  .+.-++. .|++++||.+++..-.
T Consensus       329 ~~~~~~~~~~~~-~~~~~~----~~~~~~i~G~tC~~~D~l~~~~~-lp~l~~GD~l~~~~~G  385 (434)
T 1twi_A          329 RPAMYEAYHHII-NCKVKN----EKEVVSIAGGLCESSDVFGRDRE-LDKVEVGDVLAIFDVG  385 (434)
T ss_dssp             HHHHHCCCCCEE-ESBCCS----CEEEEEEECSSSCTTCEEEEEEE-EECCCTTCEEEEECCS
T ss_pred             CHHHHHCCCEEE-ECCCCC----CCCEEEEEEECCCCCCEECCCCC-CCCCCCCCEEEECCCC
T ss_conf             224442230344-025789----97189999908889888882616-6899989999985975