HHsearch results for GI: 254780333 and protein with PDBid: 2dy3_A
>2dy3_A Alanine racemase; alpha/beta barrel, isomerase; HET: PLP; 2.10A {Corynebacterium glutamicum}
Probab=100.00 E-value=0 Score=772.91 Aligned_cols=353 Identities=26% Similarity=0.388 Sum_probs=333.1
Q ss_pred CCCEEEEEEHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCHHHHHHHHHHCCCCEEEECCHHHHHHHHHHCCCCCEEEE
Q ss_conf 88509998688999999999862899759999932866579899999999879989998559999999983898526730
Q gi|254780333|r 4 NEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVKLRLYTPQARIFVL 83 (370)
Q Consensus 4 ~~~~~leIdl~al~~Ni~~i~~~~~~~~i~aVVKanAYGhG~~~va~~l~~~Gv~~faVa~~~EA~~lR~~g~~~~Ilvl 83 (370)
.++++++|||+||+||++.+|++++++++||||||||||||+.+|++++.++||++||||+++||++||++|++.||++|
T Consensus 1 m~~~~~~IdL~al~~N~~~i~~~~~~~~i~aVVKAnAYGhG~~~va~~l~~~Gv~~faVa~~~Ea~~LR~~g~~~~Ilil 80 (361)
T 2dy3_A 1 MNLLTTKIDLDAIAHNTRVLKQMAGPAKLMAVVKANAYNHGVEKVAPVIAAHGADAFGVATLAEAMQLRDIGISQEVLCW 80 (361)
T ss_dssp CCSEEEEECHHHHHHHHHHHHHHHTTSEEEEECHHHHHHTCHHHHHHHHHHTTCCEEEESSHHHHHHHHHTTCCSEEEEC
T ss_pred CCCEEEEEEHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCHHHHHHHHHHCCCCEEEEEEHHHHHHHHHCCCCCCEEEE
T ss_conf 98369998599999999999856799849999945546378999999999869499998329999999973899976875
Q ss_pred CCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHCC
Q ss_conf 68974698888754210134899899998888760887761676126667655698899999988886310001243201
Q gi|254780333|r 84 YGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISH 163 (370)
Q Consensus 84 ~~~~~~~~~~~~~~~i~~~i~s~~~l~~l~~~~~~~~~~~vhlkiDTGM~R~G~~~~e~~~~~~~~~~~~~~~i~gi~TH 163 (370)
++..+++++.+.++++++++.+.+++..+.+ +.+.+.++|||+||||||+||.++|+.+++..+...++++++|+|||
T Consensus 81 ~~~~~~~~~~~~~~~~~~~v~s~~~~~~~~~--~~~~~~~vhLkvDTGM~RlG~~~~e~~~~~~~~~~~~~l~~~gi~tH 158 (361)
T 2dy3_A 81 IWTPEQDFRAAIDRNIDLAVISPAHAKALIE--TDAEHIRVSIKIDSGLHRSGVDEQEWEGVFSALAAAPHIEVTGMFTH 158 (361)
T ss_dssp CCCTTSCHHHHHTTTCEEEECSHHHHHHHHT--SCCSCEEEEEEBCCSSCSSSBCHHHHHHHHHHHHTCTTEEEEEEECC
T ss_pred CCCCHHHHHHHHHHCCCEEECCHHHHHHHHH--HHCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCEECCEEE
T ss_conf 5887488999997277415502899899999--72788649999878997679897999998999874356113201235
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHC-----CCCHHHCCCCHHCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCEEEE
Q ss_conf 243333466788999999999975434-----886011164110047732220204873530678776755676410012
Q gi|254780333|r 164 LACADDPSSHVNSVQLERFRTLISHYK-----GIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTA 238 (370)
Q Consensus 164 fa~ad~~~~~~~~~Q~~~F~~~~~~~~-----~~~~h~~nS~~~l~~p~~~~d~vR~Gi~lYG~~~~~~~~~~l~pv~~l 238 (370)
||+||+++.++++.|+++|+++++.++ ....|++||++++++|+.++||||||++|||+.|......+++|+|+|
T Consensus 159 ~a~ad~~d~~~~~~Q~~~F~~~~~~l~~~~~~~~~~h~anS~~~~~~~~~~~d~vR~Gi~lYG~~~~~~~~~~l~pv~~l 238 (361)
T 2dy3_A 159 LACADEPENPETDRQIIAFRRALALARKHGLECPVNHVCNSPAFLTRSDLHMEMVRPGLAFYGLEPVAGLEHGLKPAMTW 238 (361)
T ss_dssp CC--------CHHHHHHHHHHHHHHHHHTTCCCCSCBCCCHHHHHHCGGGCTTEECCCGGGGTCCSSTTCCCSCCCCEEE
T ss_pred EECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCHHHHCCCHHCCCEEECCEEEECCCCCCCCCCCCCCCCEE
T ss_conf 40468765526899999999999998752786405565153666539410166230140476667775423467853133
Q ss_pred EEEEEEEEEECCCCCCCCCCCCCCCCCCEEEEECCCCCCCEECCCCCCCCCCCCCCCCCCEEEECCEEEEEEEECCCCCE
Q ss_conf 36886326714898346656534677641797123300260102368543344432328869999999507700425647
Q gi|254780333|r 239 EARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYMVPILGKITMDMT 318 (370)
Q Consensus 239 ~s~i~~ir~l~~G~~VgYg~~~~~~~~~~iavipiGYaDG~pr~ls~~~~~~~~~~~~~~~vli~G~~~pivGrv~MD~~ 318 (370)
+|+|+++|++++|++||||++|++++|++|||+|+||||||||.+|| +++|+|+|++|||+|||||||+
T Consensus 239 ~a~i~~vr~~~~G~~vgYg~~~~~~~~~~ia~i~iGYaDG~~r~~~~-----------~~~v~i~g~~~pivGrvsMD~~ 307 (361)
T 2dy3_A 239 EAKVSVVKQIEAGQGTSYGLTWRAEDRGFVAVVPAGYADGMPRHAQG-----------KFSVTIDGLDYPQVGRVCMDQF 307 (361)
T ss_dssp EEECCEEEECC---------------CCEEEEESCCTTTTCCGGGTT-----------TCEEEETTEEEEEESCCCSSCE
T ss_pred EEEEEEEEEECCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCC-----------CCEEEECCEEEEEEEEECCCEE
T ss_conf 32113679934898666454311477715999702034665421379-----------8379989999117648537617
Q ss_pred EEECCCCC-CCCCCCEEEEECCC-CCHHHHHHHHCCCCEEEECCCCCCCCCCC
Q ss_conf 99668877-87888789997888-89989999817946042154888736445
Q gi|254780333|r 319 MFDITDSL-SIEVGDYIQIFGPD-IKLDDVALASGTTNYDLLVRIGTRYAKFY 369 (370)
Q Consensus 319 ~vdvt~~~-~~~~GD~V~l~G~~-i~~~~~A~~~gti~yEil~~i~~RvpRiY 369 (370)
|||||+.| ++++||+|+|||++ .+++++|+++|||+||++|+|++|+||+|
T Consensus 308 ~vdvt~~~~~~~~Gd~V~l~G~~~~~~~~~A~~~~ti~yEilt~l~~Rv~R~Y 360 (361)
T 2dy3_A 308 VISLGDNPHGVEAGAKAVIFGENGHDATDFAERLDTINYEVVCRPTGRTVRAY 360 (361)
T ss_dssp EEEEETCTTCCCTTCEEEEESTTSCCHHHHHHHTTSCHHHHHHCCCTTCEEEE
T ss_pred EEECCCCCCCCCCCCEEEEECCCCCCHHHHHHHHCCCCHHHHCCCCCCCCEEE
T ss_conf 99866884558999999997899999999999878972077508889887175