HHsearch results for GI: 254780333 and protein with PDBid: 3cpg_A
>3cpg_A Uncharacterized protein; unknown protein, TIM barrel, monomer, structural genomics, PSI-2, protein structure initiative; 1.71A {Bifidobacterium adolescentis ATCC15703}
Probab=99.26 E-value=1.5e-10 Score=86.63 Aligned_cols=203 Identities=16% Similarity=0.163 Sum_probs=136.6
Q ss_pred HHHHHHHHHHHH-H----------CCCCEEEEEEECCCCCCCHHHHHHHHHHCCCCEEEECCHHHHHH----HHHH----
Q ss_conf 899999999986-2----------89975999993286657989999999987998999855999999----9983----
Q gi|254780333|r 14 TALKNNWHSMNA-L----------SGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVK----LRLY---- 74 (370)
Q Consensus 14 ~al~~Ni~~i~~-~----------~~~~~i~aVVKanAYGhG~~~va~~l~~~Gv~~faVa~~~EA~~----lR~~---- 74 (370)
..|++|++.+++ + ....+|+||.|. +....| +.+.++|++.||=..++|+.+ |++.
T Consensus 23 ~~i~~nl~~V~~rI~~A~~~agR~p~~V~LiAVSK~----~p~e~I-~~a~~~G~r~FGENrvQE~~~K~~~l~~~~~~~ 97 (282)
T 3cpg_A 23 REITDGVHRVLDRIAAAEEQAGREAGSVRLLAATKT----RDIGEI-MAAIDAGVRMIGENRPQEVTAKAEGLARRCAER 97 (282)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCCTTSSEEEEECTT----CCHHHH-HHHHHTTCCCEEESCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECC----CCHHHH-HHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCC
T ss_conf 999999999999999999982989366599999899----899999-999986997036870899999999987641000
Q ss_pred --------------CCCCCEEEECCCCHHHHHHHHHH-HHHCCCCCHHHHHHHHHHH-HCCCCCCCEEEECCC--CCCCC
Q ss_conf --------------89852673068974698888754-2101348998999988887-608877616761266--67655
Q gi|254780333|r 75 --------------TPQARIFVLYGIHPGQEKIIFDT-NLIPVISSVPQLTFYSKLM-SCGVSHPYALQVDTG--FNRLG 136 (370)
Q Consensus 75 --------------g~~~~Ilvl~~~~~~~~~~~~~~-~i~~~i~s~~~l~~l~~~~-~~~~~~~vhlkiDTG--M~R~G 136 (370)
..+...-..|++.....+.++.+ +.+.+|.+...++.+++.+ +.+++.+|.|.|+++ =++.|
T Consensus 98 ~~~~~~~~~~~~~~~~~I~WHfIG~LQsNKvk~iv~~~~~IhSVDs~kla~~l~~~a~~~~~~~~vlIQVNis~E~sK~G 177 (282)
T 3cpg_A 98 GFSLGVAGAAPDAAAEHIPFHLIGQLQSNKIGKVLPVVDTIESVDSIDLAEKISRRAVARGITVGVLLEVNESGEESKSG 177 (282)
T ss_dssp TEEECCC------CCEEECEEECSCCCGGGHHHHTTTCSEEEEECCHHHHHHHHHHHHHHTCCEEEEEEBCCSSCTTSSS
T ss_pred CCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHCCCCEEEEEEECCCCCCCCCC
T ss_conf 12222223444456777269994464200077765106466542564305889988762476616999962587756688
Q ss_pred CCHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHH----C-C---C-CHHHCCCCHHCCCCC
Q ss_conf 69889999998888631000124320124333346678899999999997543----4-8---8-601116411004773
Q gi|254780333|r 137 LSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLISHY----K-G---I-EASLASSSGILLGPN 207 (370)
Q Consensus 137 ~~~~e~~~~~~~~~~~~~~~i~gi~THfa~ad~~~~~~~~~Q~~~F~~~~~~~----~-~---~-~~h~~nS~~~l~~p~ 207 (370)
+.++|..+++..+..++++++.|+||==+..+++. .....|+++.++-..+ . + + ..++.=|.-...--+
T Consensus 178 ~~p~e~~~l~~~i~~~~~l~l~GLMti~p~~~d~~--~~r~~F~~l~~l~d~l~~~~~~~~~~~~~LSMGMS~Dye~AIe 255 (282)
T 3cpg_A 178 CDPAHAIRIAQKIGTLDGIELQGLMTIGAHVHDET--VIRRGFSHLRKTRDLILASGEPGTDRCRELSMGMTGDMELAIA 255 (282)
T ss_dssp BCGGGHHHHHHHHHTCTTEEEEEEECCCCCSSCHH--HHHHHHHHHHHHHHHHHHHCCTTCTTCCEEECCCTTTHHHHHH
T ss_pred CCHHHHHHHHHHHHHHCCHHCCEEEEECCCCCCHH--HHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECHHHHHHHHHHH
T ss_conf 78777999999986510010221786368888877--8999999999999999985688779989881700779999998
Q ss_pred CCCHHHCCCCCCCCCC
Q ss_conf 2220204873530678
Q gi|254780333|r 208 YHFQLTRPGISLYGGT 223 (370)
Q Consensus 208 ~~~d~vR~Gi~lYG~~ 223 (370)
..-+|||+|.++||-.
T Consensus 256 ~GST~VRIGsaIFG~R 271 (282)
T 3cpg_A 256 EGSTIVRVGTAIFGER 271 (282)
T ss_dssp TTCSEEEESTTTC---
T ss_pred CCCCEEECCCCCCCCC
T ss_conf 6999798086523498