HHsearch results for GI: 254780333 and protein with PDBid: 3hur_A
>3hur_A Alanine racemase; structural genomics, isomerase, pyridoxal phosphate, PSI-2, protein structure initiative; 2.50A {Oenococcus oeni psu-1}
Probab=100.00 E-value=0 Score=735.44 Aligned_cols=350 Identities=24% Similarity=0.378 Sum_probs=311.9
Q ss_pred CCCEEEEEEHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCHHHHHHHHHH-CCCCEEEECCHHHHHHHHHHCCCCCEEE
Q ss_conf 885099986889999999998628997599999328665798999999998-7998999855999999998389852673
Q gi|254780333|r 4 NEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYN-AGVQDFFVTSVEEGVKLRLYTPQARIFV 82 (370)
Q Consensus 4 ~~~~~leIdl~al~~Ni~~i~~~~~~~~i~aVVKanAYGhG~~~va~~l~~-~Gv~~faVa~~~EA~~lR~~g~~~~Ilv 82 (370)
+|.+|+|||++||++|++.+|++++++++||||||||||||+.+||+++.+ .|+|+|||++++||++||++|++.|||+
T Consensus 7 ~R~t~~eIdl~al~~N~~~ir~~~~~~~i~aVVKanAYGhG~~~va~~l~e~~g~d~faVa~ieEa~~LR~~g~~~~Ilv 86 (395)
T 3hur_A 7 HRPTWVSVDLDAAAHNLQEIREWTKAKKVYAVLKADGYGLGAIPLAKAFQETASADALIVSNLDEALELRQADLTLPIWV 86 (395)
T ss_dssp SCCEEEEEEHHHHHHHHHHHHHHHTCSEEEEECCHHHHHTCHHHHHHHHHHTTCCSEEEESCHHHHHHHHHTTCCSCEEE
T ss_pred CCCEEEEEEHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHCCCCCEEEE
T ss_conf 99989998499999999999966899859999966226488899999999878999999929999999996699983999
Q ss_pred ECCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCHHHHHHHHHH-HHHHHCCCHHHHH
Q ss_conf 068974698888754210134899899998888760887761676126667655698899999988-8863100012432
Q gi|254780333|r 83 LYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQVDTGFNRLGLSLQEALDFTHN-SFNKKLGQLSLII 161 (370)
Q Consensus 83 l~~~~~~~~~~~~~~~i~~~i~s~~~l~~l~~~~~~~~~~~vhlkiDTGM~R~G~~~~e~~~~~~~-~~~~~~~~i~gi~ 161 (370)
|+++.+++++.+.++++++++++.++++.+. +.+.++++||||||||||+||.++|..+.+.+ +...++++++|+|
T Consensus 87 l~~~~~~e~~~~~~~~l~~~i~s~~~l~~~~---~~~~~~~vhlkiDTGM~RlG~~~~d~~~~~~~~~~~~~~l~l~Gi~ 163 (395)
T 3hur_A 87 LGAWDYSDLKLFIDHDIVITIPSLAWLQNLP---DFEGTLKVSLAIDTGMTRIGFDKADEISAAKKIIDKNPQLDLFSVY 163 (395)
T ss_dssp SSCCCGGGHHHHHHTTEEEEECCHHHHHTCC---CCSSCEEEEEEBCCSSCSSSBCCHHHHHHHHHHHHHCTTEEEEEEE
T ss_pred ECCCCHHHHHHHHHHHHCCCCCHHHHHHHHH---HHCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEE
T ss_conf 6688979999999843234300688886667---5168735999981788878988067899999999856886279997
Q ss_pred CCCCCCCCCCCHHH---HHHHHHHHHHHHHH--CCCCHHHCCCCHHCC---CCCCCCHHHCCCCCCCCCCCCC-----CC
Q ss_conf 01243333466788---99999999997543--488601116411004---7732220204873530678776-----75
Q gi|254780333|r 162 SHLACADDPSSHVN---SVQLERFRTLISHY--KGIEASLASSSGILL---GPNYHFQLTRPGISLYGGTDKI-----NK 228 (370)
Q Consensus 162 THfa~ad~~~~~~~---~~Q~~~F~~~~~~~--~~~~~h~~nS~~~l~---~p~~~~d~vR~Gi~lYG~~~~~-----~~ 228 (370)
|||++||+++.+.+ ..|+++|.+.+... +....|++||+++++ .|+.++||||||++|||+.|.. ..
T Consensus 164 SHla~ad~~~~~~~~~~~~q~~~f~~~~~~~~~~~~~~h~~nSa~~l~~~~~p~~~~d~vR~Gi~lYG~~p~~~~~~~~~ 243 (395)
T 3hur_A 164 THFATADEAGEKSKAYFEEQLRRWQELTINQGFDPSLFSMANSATCIWHHDDPRISFAAIRPGQLISGVNVSNGELKMPP 243 (395)
T ss_dssp CCCTTTTSCSHHHHHHHHHHHHHHHHHHTTSCCCGGGEECCCHHHHHHTTTCTTSCCSEECCCGGGGTCCTTTTSSCCCT
T ss_pred EECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCC
T ss_conf 61146663342116899999999999998459984266512404466325770104634751120136667754334565
Q ss_pred CCCCCCEEEEEEEEEEEEEECCCCCCCCCCCCCCCCCCEEEEECCCCCCCEECCCCCCCCCCCCCCCCCCEEEECCEEEE
Q ss_conf 56764100123688632671489834665653467764179712330026010236854334443232886999999950
Q gi|254780333|r 229 SHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYMVP 308 (370)
Q Consensus 229 ~~~l~pv~~l~s~i~~ir~l~~G~~VgYg~~~~~~~~~~iavipiGYaDG~pr~ls~~~~~~~~~~~~~~~vli~G~~~p 308 (370)
..+|+|+|+|+|+|+++|++++|++||||++|++++|++|||+|+||||||||.+++ ++|+|+|++||
T Consensus 244 ~~~l~pv~sl~a~Ii~vr~~~~G~~vGYg~~~~a~~~~~iavv~iGYaDG~~r~~~~------------~~vli~G~~~p 311 (395)
T 3hur_A 244 NLHLERIFSVCSEIADVRFVKKDQSLSYGASERMPEDGYVATLPFGYNDGWLRRMQK------------SSVIINGKRMP 311 (395)
T ss_dssp TCCCCCCEEEEEECCEEEEECTTCBSSTTCSCBCSSSEEEEEESCCTTCGGGGGEEE------------EEEEETTEEEE
T ss_pred CCCCCCHHHHHHHCCEEEEECCCCEEECCCCCCCCCCCEEEEECCCCCCCCCCCCCC------------CEEEECCEEEE
T ss_conf 434453133201001147715897262155412577725997226656883300479------------87999999989
Q ss_pred EEEECCCCCEEEECCCCCCCCCCCEEEEECCC----CCHHHHHHHHCCCCEEEECCCCCCCCCCCC
Q ss_conf 77004256479966887787888789997888----899899998179460421548887364459
Q gi|254780333|r 309 ILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALASGTTNYDLLVRIGTRYAKFYT 370 (370)
Q Consensus 309 ivGrv~MD~~~vdvt~~~~~~~GD~V~l~G~~----i~~~~~A~~~gti~yEil~~i~~RvpRiY~ 370 (370)
|+|||||||+|||+|+ ++++||+|+|||++ +|++++|+++|||+||+||+|++|+||+|.
T Consensus 312 ivG~isMD~~~vdv~~--~~~vGD~V~l~G~~g~~~it~~~~A~~~~ti~yEil~~l~~Rv~R~Y~ 375 (395)
T 3hur_A 312 IIGRITMDQTMVKLDR--KYPIGTRVTLIGKDGGEQITVEEVANYSHTIVDEIQTTLAPRIKRIYT 375 (395)
T ss_dssp BCSCCCSSCEEEECSS--CCCTTCEEEEEESSTTCCSEEEEEEECSSCEEEEEEECSCTTSCEEEE
T ss_pred EEEEECCCEEEEECCC--CCCCCCEEEEEECCCCCCCCHHHHHHHHCCCCHHHHHCCCCCCCEEEE
T ss_conf 8618834528998989--999999999995899986399999998789701575287888884991