HHsearch results for GI: 254780333 and protein with PDBid: 3n29_A
>3n29_A Carboxynorspermidine decarboxylase; lyase; HET: PLP; 1.90A {Campylobacter jejuni subsp}
Probab=99.14 E-value=8.4e-09 Score=75.34 Aligned_cols=297 Identities=12% Similarity=0.044 Sum_probs=153.3
Q ss_pred EEEEEEHHHHHHHHHHHHHHC--CCCEEEEEEECCCCCCCHHHHHHHHHHCCCCEEEECCHHHHHHHHHHCCCCCEEEEC
Q ss_conf 099986889999999998628--997599999328665798999999998799899985599999999838985267306
Q gi|254780333|r 7 LRLKIDLTALKNNWHSMNALS--GNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVKLRLYTPQARIFVLY 84 (370)
Q Consensus 7 ~~leIdl~al~~Ni~~i~~~~--~~~~i~aVVKanAYGhG~~~va~~l~~~Gv~~faVa~~~EA~~lR~~g~~~~Ilvl~ 84 (370)
|--.+|++.|++|++.+++.. ++.+++--+|||. ...+.+.+.+.|+ +|-|++..|+... ..+...+|++.+
T Consensus 45 P~yVyd~~~i~~n~~~l~~a~~~~~~~i~YAvKAN~----~~~vl~~l~~~g~-g~dv~S~~El~la-~~~~~~~ii~~~ 118 (418)
T 3n29_A 45 PAYILEEDKLRKNCELLASVGEKSGAKVLLALKGFA----FSGAMKIVGEYLK-GCTCSGLWEAKFA-KEYMDKEIHTYS 118 (418)
T ss_dssp SEEEEEHHHHHHHHHHHHHHHHHHCCEEEEETTTCC----CGGGHHHHHHHSC-EEEESSHHHHHHH-HHHTCSEEEEEE
T ss_pred CEEEEEHHHHHHHHHHHHHHHHCCCCEEEEEECCCC----CHHHHHHHHHHCC-EEEECCHHHHHHH-CCCCCCCEEEEC
T ss_conf 989976999999999999876037988999964379----9899999997099-2995299999985-456998079949
Q ss_pred CC-CHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCEEEECCC--------------CCCCCCCHHHHHHHHHHH
Q ss_conf 89-746988887542101348998999988887608877616761266--------------676556988999999888
Q gi|254780333|r 85 GI-HPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQVDTG--------------FNRLGLSLQEALDFTHNS 149 (370)
Q Consensus 85 ~~-~~~~~~~~~~~~i~~~i~s~~~l~~l~~~~~~~~~~~vhlkiDTG--------------M~R~G~~~~e~~~~~~~~ 149 (370)
+. .++++..+.+++...++.|.++++.+.+.. ...++-|-|+.+ -.++|++.++..+
T Consensus 119 p~k~~~ei~~a~~~g~~i~~DS~~El~~i~~~~---~~~~v~lRvnp~~~~~~~~~~~~~g~~skfGi~~~~~~~----- 190 (418)
T 3n29_A 119 PAFKEDEIGEIASLSHHIVFNSLAQFHKFQSKT---QKNSLGLRCNVEFSLAPKELYNPCGRYSRLGIRAKDFEN----- 190 (418)
T ss_dssp SSCCHHHHHHHHHHCSEEEESSHHHHHHHGGGC---TTSEEEEEBCCCCC----------CTTCCSSBCGGGGTT-----
T ss_pred CCCCHHHHHHHHHCCCEEEECCHHHHHHHHHHC---CCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHH-----
T ss_conf 989899999999839989976989999999757---799589999358777877410146777634575788877-----
Q ss_pred HHHHCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHCCCCHHC--CCCCCCCH----HHCCCCCCCCCC
Q ss_conf 863100012432012433334667889999999999754348860111641100--47732220----204873530678
Q gi|254780333|r 150 FNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLISHYKGIEASLASSSGIL--LGPNYHFQ----LTRPGISLYGGT 223 (370)
Q Consensus 150 ~~~~~~~i~gi~THfa~ad~~~~~~~~~Q~~~F~~~~~~~~~~~~h~~nS~~~l--~~p~~~~d----~vR~Gi~lYG~~ 223 (370)
.....+.|+ ||+.........-..-++.+.+..+.. +.....-|=+|=+ .+++..++ .++.-..-|+..
T Consensus 191 --~~~~~i~gl--h~H~gs~~~~~~l~~~~~~~~~~~~~~-~~~l~~ldiGGGf~v~y~~~~~~~~~~~i~~~~~~~~~~ 265 (418)
T 3n29_A 191 --VDLNAIEGL--HFHALCEESADALEAVLKVFEEKFGKW-IGQMKWVNFGGGHHITKKGYDVEKLIALCKNFSDKYGVQ 265 (418)
T ss_dssp --CCCTTCCEE--ECCCCSSBCHHHHHHHHHHHHHHHGGG-TTTCSEEECCSCBCTTSTTCCHHHHHHHHHHHHHHHTCE
T ss_pred --HHHHCCCCC--EECCCCCCCHHHHHHHHHHHHHHHHHH-CCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCC
T ss_conf --776336403--216786773589999999999999964-777447761573466756569999999999998753886
Q ss_pred --CCCCCCCCCCCEEEEEEEEEEEEEECCCCCCCCCCCCCCCCCCEEEEECCCCCCCEECCCCC-CC--CCC-----CCC
Q ss_conf --77675567641001236886326714898346656534677641797123300260102368-54--334-----443
Q gi|254780333|r 224 --DKINKSHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSG-LD--SEH-----SPS 293 (370)
Q Consensus 224 --~~~~~~~~l~pv~~l~s~i~~ir~l~~G~~VgYg~~~~~~~~~~iavipiGYaDG~pr~ls~-~~--~~~-----~~~ 293 (370)
-+++..+ ..++..+-++|+.+|.- .+.. .++-.|-.+.+++.+.. .. ..+ ...
T Consensus 266 liiEPGR~l-va~ag~lvt~V~~vK~~-------~~~~---------~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (418)
T 3n29_A 266 VYLEPGEAV-GWQTGNLVASVVDIIEN-------EKQI---------AILDTSSEAHMPDTIIMPYTSEVLNARILATRE 328 (418)
T ss_dssp EEECCSHHH-HTTSEEEEEEEEEEEES-------SSEE---------EEESSCHHHHSHHHHHTTCCCCBTTEEEEECTT
T ss_pred EEECCEEEE-CCCCEEEEEEEEEEEEC-------CCCE---------EEEECCCCCCCCHHHHHHCCCCEECCCCCCCCC
T ss_conf 487453001-03736999999999545-------8648---------999786435784377630474313254445444
Q ss_pred CCCCCEEEECCEEEEEEEECCC--CCEEEECCCCCCCCCCCEEEEECCC
Q ss_conf 2328869999999507700425--6479966887787888789997888
Q gi|254780333|r 294 VFLGGKGFIKGYMVPILGKITM--DMTMFDITDSLSIEVGDYIQIFGPD 340 (370)
Q Consensus 294 ~~~~~~vli~G~~~pivGrv~M--D~~~vdvt~~~~~~~GD~V~l~G~~ 340 (370)
.......--....+-|.|..|+ |.+.-++ ..|++++||.+.+..-.
T Consensus 329 ~~~~~~~~~~~~~~~V~Gp~C~s~D~l~~~~-~lp~l~~GD~l~~~~~G 376 (418)
T 3n29_A 329 NEKISDLKENEFAYLLTGNTCLAGDVMGEYA-FDKKLKIGDKIVFLDQI 376 (418)
T ss_dssp CCBCCCCCTTCEEEEEECSSSCTTCEEEEEE-ESSCCCTTCEEEESSCS
T ss_pred CCCCCCCCCCEEEEEEECCCCCCCCEEEECC-CCCCCCCCCEEEEECCC
T ss_conf 4335566788148999817989875982047-67899999999992875