HHsearch results for GI: 254780333 and protein with PDBid: 3nzp_A
>3nzp_A Arginine decarboxylase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: PLP; 3.00A {Campylobacter jejuni subsp}
Probab=98.50 E-value=1.6e-05 Score=54.17 Aligned_cols=157 Identities=16% Similarity=0.134 Sum_probs=111.5
Q ss_pred CEEEEEEHHHHHHHHHHHHH-H---------CCCCEEEEEEECCCCCCCHHHHHHHHHHCCCC---EEEECCHHHHHHHH
Q ss_conf 50999868899999999986-2---------89975999993286657989999999987998---99985599999999
Q gi|254780333|r 6 FLRLKIDLTALKNNWHSMNA-L---------SGNARTAAVVKDNAYGLGCEKIAPALYNAGVQ---DFFVTSVEEGVKLR 72 (370)
Q Consensus 6 ~~~leIdl~al~~Ni~~i~~-~---------~~~~~i~aVVKanAYGhG~~~va~~l~~~Gv~---~faVa~~~EA~~lR 72 (370)
.|=...+.+.|++|++.+++ . .++-+++--+|+|- ...|.+.+.+.|.. +|=|+|..|-...+
T Consensus 45 tPl~v~~~dil~~ri~~l~~aF~~A~~~~~y~g~y~~~YAvKaN~----~~~Vl~~l~~~G~~~~~GlEv~S~~EL~~Al 120 (619)
T 3nzp_A 45 GPLLLRFPHLIQKQIENIYGNFNKARKEFGYKGGFNAVYPLKVNQ----YPGFVKNLVKLGKDYNYGLEAGSKAELLLAM 120 (619)
T ss_dssp SCEEEECHHHHHHHHHHHHHHHHHHHHHTTCCSCEEEEEEGGGCC----CHHHHHHHHHHTGGGTCEEEECSHHHHHHHH
T ss_pred CCEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCC----CHHHHHHHHHHCCCCCCEEEEECHHHHHHHH
T ss_conf 988997089999999999999999999808788818998862489----9999999998374258818997999999999
Q ss_pred HHCCCCCEEEECCCCHHHHH------HHHHHHHHCCCCCHHHHHHHHHHHHC--CCCCCCEEEE-----------CCC--
Q ss_conf 83898526730689746988------88754210134899899998888760--8877616761-----------266--
Q gi|254780333|r 73 LYTPQARIFVLYGIHPGQEK------IIFDTNLIPVISSVPQLTFYSKLMSC--GVSHPYALQV-----------DTG-- 131 (370)
Q Consensus 73 ~~g~~~~Ilvl~~~~~~~~~------~~~~~~i~~~i~s~~~l~~l~~~~~~--~~~~~vhlki-----------DTG-- 131 (370)
.+|.+..-+++++....+.. .....+++.++.|.++|+.+.++.+. +....+-+-+ .||
T Consensus 121 ~~g~~~~~Ii~nG~kk~e~~~~a~l~~~l~~~v~ivvDs~~EL~~I~~~a~~~~~~~~~IglRi~~~~~~~~~~~~tgg~ 200 (619)
T 3nzp_A 121 AYNNEGAPITVNGFKDRELINIGFIAAEMGHNITLTIEGLNELEAIIDIAKERFKPKPNIGLRVRLHSAGVGIWAKSGGI 200 (619)
T ss_dssp HHSCTTSEEEECSCCCHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHTTSCSCCCEEEEEBCCTTC-----------
T ss_pred HCCCCCCEEEECCCCCHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCCCCCCC
T ss_conf 67989897998997885999999998611888488879999999999999985499876521323675566742246887
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHCC-CHHHHHCCCCC
Q ss_conf 676556988999999888863100-01243201243
Q gi|254780333|r 132 FNRLGLSLQEALDFTHNSFNKKLG-QLSLIISHLAC 166 (370)
Q Consensus 132 M~R~G~~~~e~~~~~~~~~~~~~~-~i~gi~THfa~ 166 (370)
-+++|++.+++.++++.+...+.+ .+.|+-.|..+
T Consensus 201 ~SKFGl~~~ei~~~i~~l~~~~~l~~l~GlHfHiGS 236 (619)
T 3nzp_A 201 NSKFGLTSTELIEAVNLLKENKLLEQFTMIHFHLGS 236 (619)
T ss_dssp --CCSBCHHHHHHHHHHHHHTTCTTTEEEEECCCCS
T ss_pred CCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEEECCC
T ss_conf 565786378899999999865776706899982587