HHsearch results for GI: 254780333 and protein with PDBid: 3oo2_A
>3oo2_A Alanine racemase 1; infectious diseases, center for structural of infectious diseases (csgid); 2.37A {Staphylococcus aureus subsp}
Probab=100.00 E-value=0 Score=751.31 Aligned_cols=352 Identities=27% Similarity=0.394 Sum_probs=322.2
Q ss_pred CCCEEEEEEHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCHHHHHHHHHHCCCCEEEECCHHHHHHHHHHCCCCCEEEE
Q ss_conf 88509998688999999999862899759999932866579899999999879989998559999999983898526730
Q gi|254780333|r 4 NEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVKLRLYTPQARIFVL 83 (370)
Q Consensus 4 ~~~~~leIdl~al~~Ni~~i~~~~~~~~i~aVVKanAYGhG~~~va~~l~~~Gv~~faVa~~~EA~~lR~~g~~~~Ilvl 83 (370)
+|.+|+|||+++|+||++.+|++++++++||||||||||||+.+||+++.++||++|||++++||++||++|++.|||+|
T Consensus 9 ~R~t~leIdl~al~~N~~~ir~~~~~~~i~aVVKAnAYGhG~~~va~~l~~~Gv~~faVa~~~EA~~LR~~gi~~~Ilvl 88 (385)
T 3oo2_A 9 YRSAYMNVDLNAVASNFKVFSTLHPNKTVMAVVKANAYGLGSVKVARHLMENGATFFAVATLDEAIELRMHGITAKILVL 88 (385)
T ss_dssp CSSEEEEEEHHHHHHHHHHHHHHSTTSEEEEECHHHHHTTCHHHHHHHHHHTTCCEEEESSHHHHHHHHTTTCCSEEEEC
T ss_pred CCCEEEEECHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCHHHHHHHHHHCCCCEEEEEEHHHHHHHHHCCCCCCEEEE
T ss_conf 68889999499999999999955899859999966036488999999999869799999089999999966999855761
Q ss_pred CCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHH-H-HCCCCCCCEEEECCCCCCCCCCHHH-HHHHHHHHHHHHCCCHHHH
Q ss_conf 68974698888754210134899899998888-7-6088776167612666765569889-9999988886310001243
Q gi|254780333|r 84 YGIHPGQEKIIFDTNLIPVISSVPQLTFYSKL-M-SCGVSHPYALQVDTGFNRLGLSLQE-ALDFTHNSFNKKLGQLSLI 160 (370)
Q Consensus 84 ~~~~~~~~~~~~~~~i~~~i~s~~~l~~l~~~-~-~~~~~~~vhlkiDTGM~R~G~~~~e-~~~~~~~~~~~~~~~i~gi 160 (370)
+++.+.+++.+.++++++++++.+++..+.+. . +.++.+++||||||||||+||.++| ..++++.+...+++.++|+
T Consensus 89 ~~~~~~e~~~~~~~~l~~~i~~~~~l~~~~~~~~~~~~~~~~vhLkiDTGM~RlG~~~~e~~~~~~~~~~~~~~l~i~Gi 168 (385)
T 3oo2_A 89 GVLPAKDIDKAIQHRVALTVPSKQWLKEAIKNISGEQEKKLWLHIKLDTGMGRLGIKDTKTYQEVIEIIQQYEQLVFEGV 168 (385)
T ss_dssp SCCCGGGHHHHHHTTEEEEECCHHHHHHHHHTCCSSCCSCEEEEEEBCCSSCCSSBCSHHHHHHHHHHHTTCTTEEEEEE
T ss_pred CCCCHHHHHHHHHHHHHCEEEHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEE
T ss_conf 56662669999973100144146666789999876348963799997578876788836789999999753574578889
Q ss_pred HCCCCCCCCCCCHHHHHHHHHHHHHHHHH-CCCCHHHCCCCHHCCCCCCCCHHHCCCCCCCCCCCCC----CCCCCCCCE
Q ss_conf 20124333346678899999999997543-4886011164110047732220204873530678776----755676410
Q gi|254780333|r 161 ISHLACADDPSSHVNSVQLERFRTLISHY-KGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKI----NKSHPMQTV 235 (370)
Q Consensus 161 ~THfa~ad~~~~~~~~~Q~~~F~~~~~~~-~~~~~h~~nS~~~l~~p~~~~d~vR~Gi~lYG~~~~~----~~~~~l~pv 235 (370)
|||||+||+++. ++..|+++|.++.... +....|++||++++++|+.++||||||++|||++|.. ....+|+|+
T Consensus 169 ~SH~a~ad~~~~-~~~~q~~~f~~~~~~~~~~~~~h~anS~~~~~~~~~~~d~vR~Gi~lyG~~p~~~~~~~~~~~lkpv 247 (385)
T 3oo2_A 169 FTHFACADEPGD-MTTEQYQRFKDMVNEAIKPEYIHCQNSAGSLLMDCQFCNAIRPGISLYGYYPSEYVQQKVKVHLKPS 247 (385)
T ss_dssp ECCCSSTTSSSS-HHHHHHHHHHHHHHTSCCCSEEEEECHHHHHHCCCTTCCEECCCGGGGTCCSSHHHHHHCCCCCCCC
T ss_pred EEECCCCCCCCH-HHHHHHHHHHHHHHHCCCCCCEECCCCHHHHCCCHHHCCEECCCEEEECCCCCCCCCCCCCCCCCCE
T ss_conf 860133443320-4489999998876522686520012437565582765560234279986567532133222355650
Q ss_pred EEEEEEEEEEEEECCCCCCCCCCCCCCCCCCEEEEECCCCCCCEECCCCCCCCCCCCCCCCCCEEEECCEEEEEEEECCC
Q ss_conf 01236886326714898346656534677641797123300260102368543344432328869999999507700425
Q gi|254780333|r 236 VTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYMVPILGKITM 315 (370)
Q Consensus 236 ~~l~s~i~~ir~l~~G~~VgYg~~~~~~~~~~iavipiGYaDG~pr~ls~~~~~~~~~~~~~~~vli~G~~~pivGrv~M 315 (370)
|+|+|+|+++|++++|++||||++|++++|++|||||+||||||||.++| ++|+|+|++|||+|||||
T Consensus 248 ~~l~a~ii~i~~l~~G~~vgYg~~~~a~~~~~ia~v~iGYaDG~~r~~~~------------~~v~i~G~~~pivGri~M 315 (385)
T 3oo2_A 248 VQLIANVVQTKTLQAGESVSYGATYTATDPTTIALLPIGYADGYLRIMQG------------SFVNVNGHQCEVIGRVCM 315 (385)
T ss_dssp EEEEEECCEEEEECTTCBCCCC--CBCSSCEEEEEESCCGGGTCCGGGTT------------CEEEETTEEEEEESCCCS
T ss_pred EEEEEEEEEEEEECCCCCCCCCCEEECCCCCCEEEEEEEEECCCCCCCCC------------CEEEECCEEEEEEEEECC
T ss_conf 78777778899834998656686045067742899962300560523689------------889999999258708656
Q ss_pred CCEEEECCCCCCCCCCCEEEEECCC----CCHHHHHHHHCCCCEEEECCCCCCCCCCCC
Q ss_conf 6479966887787888789997888----899899998179460421548887364459
Q gi|254780333|r 316 DMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALASGTTNYDLLVRIGTRYAKFYT 370 (370)
Q Consensus 316 D~~~vdvt~~~~~~~GD~V~l~G~~----i~~~~~A~~~gti~yEil~~i~~RvpRiY~ 370 (370)
||+|||||+ ++++||+|+|||++ +|++++|+++|||+||++|+|++|+||+|.
T Consensus 316 D~~~vDv~~--~~~~GD~V~l~G~~~~~~~~~~~~A~~~~ti~yEilt~l~~Rv~R~Y~ 372 (385)
T 3oo2_A 316 DQTIVKVPD--QVKAGDSVILIDNHRESPQSVEVVAEKQHTINYEVLCNLSRRLPRIYH 372 (385)
T ss_dssp SCEEEEECT--TCCTTCEEEEECSCSSSTTSHHHHHHHTTSCHHHHHHHCCTTSCEEEE
T ss_pred CCEEEECCC--CCCCCCEEEEEECCCCCCCCHHHHHHHHCCCCCHHHHCCCCCCCEEEE
T ss_conf 716998899--999999999972899878899999998699500564087888883998