PSIBLAST alignment of GI: 254780333 and protein with PDB id: 1rcq
>gi|49258690|pdb|1RCQ|A Chain A, The 1.45 A Crystal Structure Of Alanine Racemase From A Pathogenic Bacterium, Pseudomonas Aeruginosa, Contains Both Internal And External Aldimine Forms Length = 357
Score = 295 bits (754), Expect = 1e-77, Method: Composition-based stats.
Identities = 102/369 (27%), Positives = 160/369 (43%), Gaps = 18/369 (4%)
Query: 5 EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
R IDL AL++N+ +G AR AV+K +AYG G + A AL F V
Sbjct: 2 RPARALIDLQALRHNYRLAREATG-ARALAVIKADAYGHGAVRCAEALAAE-ADGFAVAC 59
Query: 65 VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
+EEG++LR + I +L G E + + + + S
Sbjct: 60 IEEGLELREAGIRQPILLLEGFFEASELELIVAHDFWCVVHCAWQLEAIERASLARPLNV 119
Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
L +D+G +R+G ++ +++SH + AD+ QL F
Sbjct: 120 WLXMDSGMHRVGFFPEDFRAAHERLRASGKVAKIVMMSHFSRADELDCPRTEEQLAAFSA 179
Query: 185 LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKS---HPMQTVVTAEAR 241
+G E SL +S +L P RPGI LYG T ++ V+T E++
Sbjct: 180 ASQGLEG-EISLRNSPAVLGWPKVPSDWVRPGILLYGATPFERAHPLADRLRPVMTLESK 238
Query: 242 IILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGF 301
+I +R AGE V YG + R I V A+GYADGYP G F
Sbjct: 239 VISVRDLPAGEPVGYGARYSTERRQRIGVVAMGYADGYPRHA-----------ADGTLVF 287
Query: 302 IKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRI 361
I G ++G+++MDM D+TD +G ++++GP++ + +A G+ Y LL +
Sbjct: 288 IDGKPGRLVGRVSMDMLTVDLTDHPQAGLGSRVELWGPNVPVGALAAQFGSIPYQLLCNL 347
Query: 362 GTRYAKFYT 370
R + Y+
Sbjct: 348 -KRVPRVYS 355