PSIBLAST alignment of GI: 254780333 and protein with PDB id: 3co8
>gi|178847612|pdb|3CO8|A Chain A, Crystal Structure Of Alanine Racemase From Oenococcus Oeni Length = 380
>gi|178847613|pdb|3CO8|B Chain B, Crystal Structure Of Alanine Racemase From Oenococcus Oeni Length = 380
Score = 182 bits (461), Expect = 9e-44, Method: Composition-based stats.
Identities = 81/377 (21%), Positives = 136/377 (36%), Gaps = 28/377 (7%)
Query: 4 NEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
+ R++ ++L N +SG VK NAYG G +++ GV V+
Sbjct: 7 HRSTRIEFSKSSLAYNVQYTKQVSGAKTLWLAVKSNAYGHGLLQVSKIARECGVDGLAVS 66
Query: 64 SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
++EG+ +R I +L I I + + +SS+ L K++
Sbjct: 67 VLDEGIAIRQAGIDDFILILGPIDVKYAPIASKYHFLTTVSSLDWLKSADKILGKEK-LS 125
Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSL--IISHLACADDPSSHVNSVQLER 181
L VDTG NR+G+ ++ L + S I +H A +D+P H Q R
Sbjct: 126 VNLAVDTGXNRIGVRSKKDLKDEIEFLQEHSDHFSYDGIFTHFASSDNPDDHYFQRQKNR 185
Query: 182 FRTLISHYKGIEASL--ASSSGILLGPNYHFQ--LTRPGISLYGGTDKINKSHPMQ---T 234
+ LI S + + R G +YG P+
Sbjct: 186 WYELIDGLIXPRYVHVXNSGAAXYHSKELPGCNSIARVGTVVYGVEPSEGVLGPIDKLKP 245
Query: 235 VVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSV 294
V ++ + ++K AGE +SYG + +RD+ I IGY DG+
Sbjct: 246 VFELKSALTFVKKIPAGEGISYGSKFVTSRDTWIGTLPIGYGDGWLAEYQDFQL------ 299
Query: 295 FLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGP----DIKLDDVALAS 350
I G +G+I D + +G + + G + L D+ S
Sbjct: 300 ------LIDGQKCRQVGQIAXDQXXVALPHEYP--IGTEVTLIGKSGKYENTLYDLHKHS 351
Query: 351 GTTNYDLLVRIGTRYAK 367
G + + V R +
Sbjct: 352 GVPPWKITVAFSDRLKR 368