RPSBLAST alignment of GI: 254780333 and protein with PDBid: 3co8

>3co8_A Alanine racemase; protein structure initiative II, PSI-II, NYSGXRC, PLP, TIM barrel, structural genomics; HET: PLP; 1.70A {Oenococcus oeni psu-1} Length = 380

 Score =  212 bits (541), Expect = 7e-56
 Identities = 83/375 (22%), Positives = 139/375 (37%), Gaps = 28/375 (7%)

Query: 8   RLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEE 67
           R++   ++L  N      +SG       VK NAYG G  +++      GV    V+ ++E
Sbjct: 11  RIEFSKSSLAYNVQYTKQVSGAKTLWLAVKSNAYGHGLLQVSKIARECGVDGLAVSVLDE 70

Query: 68  GVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQ 127
           G+ +R       I +L  I      I    + +  +SS+  L    K +         L 
Sbjct: 71  GIAIRQAGIDDFILILGPIDVKYAPIASKYHFLTTVSSLDWLKSADK-ILGKEKLSVNLA 129

Query: 128 VDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLI--ISHLACADDPSSHVNSVQLERFRTL 185
           VDTG NR+G+  ++ L        +     S     +H A +D+P  H    Q  R+  L
Sbjct: 130 VDTGMNRIGVRSKKDLKDEIEFLQEHSDHFSYDGIFTHFASSDNPDDHYFQRQKNRWYEL 189

Query: 186 ISHYKGIEASLASSSGILLGPNYHFQ----LTRPGISLYGGTDKINKSHP---MQTVVTA 238
           I            +SG  +  +        + R G  +YG         P   ++ V   
Sbjct: 190 IDGLIMPRYVHVMNSGAAMYHSKELPGCNSIARVGTVVYGVEPSEGVLGPIDKLKPVFEL 249

Query: 239 EARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGG 298
           ++ +  ++K  AGE +SYG +   +RD+ I    IGY DG+                   
Sbjct: 250 KSALTFVKKIPAGEGISYGSKFVTSRDTWIGTLPIGYGDGWLAEYQ------------DF 297

Query: 299 KGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALASGTTN 354
           +  I G     +G+I MD  M  +       +G  + + G        L D+   SG   
Sbjct: 298 QLLIDGQKCRQVGQIAMDQMMVALPH--EYPIGTEVTLIGKSGKYENTLYDLHKHSGVPP 355

Query: 355 YDLLVRIGTRYAKFY 369
           + + V    R  +  
Sbjct: 356 WKITVAFSDRLKRMV 370