HHsearch alignment for GI: 254780334 and conserved domain: CHL00059

Probab=97.91  E-value=0.00019  Score=51.93  Aligned_cols=167  Identities=17%  Similarity=0.255  Sum_probs=98.0

Q ss_pred             CCCCCCCHHHHHHHCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHC---CCCCCC
Q ss_conf             63237812488886598578708999549875188999999999850398199998646304788887520---157751
Q gi|254780334|r   70 SRIQTHIDELDRVTGGGFVRGSVILVGGDPGIGKSTLLMQTAASLAYKKHRITYVSGEEAIGQIRLRAQRL---NTINSS  146 (479)
Q Consensus        70 ~Ri~TGi~eLDrvLGGGl~~Gs~~Li~G~PGvGKSTL~Lqia~~~a~~g~~vlYvS~EEs~~Qi~~Ra~Rl---~~~~~~  146 (479)
T Consensus       145 epL~TGIkaID~l~--PiGrGQR~lI~Gd~gvGKTtl~~d~Iinqk~~~vicVyvaIGeR~reV~~~i~~l~~~gam~~T  222 (501)
T CHL00059        145 EPLQTGLIAIDSMI--PIGRGQRELIIGDRQTGKTAVATDTILNQKGQNVICVYVAIGQKASSVAQVVTTLQERGAMEYT  222 (501)
T ss_pred             CCCCCCCEEEECCC--CCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCEEEEEEEEEEHHHHHHHHHHHHHCCCCEEE
T ss_conf             42323421110036--7667756677557884477999999985246884899998556277899999999756971036


Q ss_pred             HHEECCCC---H---------HHHHHHHHHCCCCCEEEECHHHHHHH------------HHHCCCCCCHHHHHHHHHHHH
Q ss_conf             00003478---8---------99999997316982899721687665------------420445563679999999999
Q gi|254780334|r  147 VYIAIETN---V---------EDIIATLITNEKPDLVIIDSIQTLWS------------QTAESSPGTVIQVRTSVQAMI  202 (479)
Q Consensus       147 i~~~~e~~---l---------~~il~~~i~~~~~~~vVIDSIQtl~~------------~~~~s~~GsvsQvre~~~~L~  202 (479)
T Consensus       223 vvV~Atadepa~lr~~Apyaa~aIAEyFrdqGkdVLlv~DdLTr~A~A~REisLllgrPPgregYPgdVFy---lhsrLl  299 (501)
T CHL00059        223 IVVAETADSPATLQYLAPYTGAALAEYFMYRERHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFY---LHSRLL  299 (501)
T ss_pred             EEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCCHHH---HHHHHH
T ss_conf             99961799999999999999999999999779828999868269889999989864899976678962887---857898


Q ss_pred             HHH-HHC------CCEEEEEEEECCCCCCCCH--HHHHHHHHEEEEEEC
Q ss_conf             975-307------9789998630366543311--457877530278515
Q gi|254780334|r  203 QYA-KKN------GVAMVLVGHVTKEGQIAGP--RVIEHMVDAVLYFEG  242 (479)
Q Consensus       203 ~~A-K~~------~i~vilighvTK~G~iAGp--~~LeH~VD~vl~~eg  242 (479)
T Consensus       300 ERa~kl~~~~ggGSiTalpiv-et~~~D~s~yIptnviSItDGqI~L~~  347 (501)
T CHL00059        300 ERAAKLSSQLGEGSMTALPIV-ETQSGDVSAYIPTNVISITDGQIFLSA  347 (501)
T ss_pred             HHHHHCCCCCCCEEEEEEEEE-EECCCCCCCCCCHHHHHHCCCEEEEEH
T ss_conf             776505789998847888899-823886455554104440574299856