HHsearch alignment for GI: 254780334 and conserved domain: CHL00060
>CHL00060 atpB ATP synthase CF1 beta subunit.
Probab=97.55 E-value=0.0065 Score=40.80 Aligned_cols=58 Identities=28% Similarity=0.402 Sum_probs=46.9
Q ss_pred CCCCCCCHHHHHHHCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHCC-CCCEEEEE-CCCC
Q ss_conf 632378124888865985787089995498751889999999998503-98199998-6463
Q gi|254780334|r 70 SRIQTHIDELDRVTGGGFVRGSVILVGGDPGIGKSTLLMQTAASLAYK-KHRITYVS-GEEA 129 (479)
Q Consensus 70 ~Ri~TGi~eLDrvLGGGl~~Gs~~Li~G~PGvGKSTL~Lqia~~~a~~-g~~vlYvS-~EEs 129 (479)
T Consensus 137 e~leTGIkaID~l~--pigkGQRigIfggaGvGKTvLl~eli~niak~~~~v~V~a~IGER~ 196 (480)
T CHL00060 137 SIFETGIKVVDLLA--PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERT 196 (480)
T ss_pred CCHHCCHHHHHCCC--CCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCC
T ss_conf 61102704443125--4003668876568998878999999961200379889999966773