HHsearch alignment for GI: 254780334 and conserved domain: COG0305

>COG0305 DnaB Replicative DNA helicase [DNA replication, recombination, and repair].
Probab=99.81  E-value=2.4e-18  Score=153.41  Aligned_cols=198  Identities=21%  Similarity=0.329  Sum_probs=144.5

Q ss_pred             CCCCCCCCHHHHHHHCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCC-CCEEEEECCCCHHHHHHHHH---------
Q ss_conf             66323781248888659857870899954987518899999999985039-81999986463047888875---------
Q gi|254780334|r   69 ESRIQTHIDELDRVTGGGFVRGSVILVGGDPGIGKSTLLMQTAASLAYKK-HRITYVSGEEAIGQIRLRAQ---------  138 (479)
Q Consensus        69 ~~Ri~TGi~eLDrvLGGGl~~Gs~~Li~G~PGvGKSTL~Lqia~~~a~~g-~~vlYvS~EEs~~Qi~~Ra~---------  138 (479)
T Consensus       176 ~~Gi~tgf~~LD~~t~-G~~~~dLiilAaRP~mGKTafalnia~n~a~~~~~~v~iFSLEM~~eql~~R~Ls~~s~v~~~  254 (435)
T COG0305         176 LIGVPTGFTDLDEITS-GFRPGDLIIVAARPGMGKTALALNIALNAAADGRKPVAIFSLEMSEEQLVMRLLSSESGIESS  254 (435)
T ss_pred             CCCCCCCCHHHHHHHC-CCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHCCCCCCCHH
T ss_conf             8514468345677733-774677799716899975899999999999855897599982679999999753401154510


Q ss_pred             --HCCC----------------CCCCHHEECC--CCHHHH---HHHHHHCCCCCEEEECHHHHHHHHHHCCCCCCHHHHH
Q ss_conf             --2015----------------7751000034--788999---9999731698289972168766542044556367999
Q gi|254780334|r  139 --RLNT----------------INSSVYIAIE--TNVEDI---IATLITNEKPDLVIIDSIQTLWSQTAESSPGTVIQVR  195 (479)
Q Consensus       139 --Rl~~----------------~~~~i~~~~e--~~l~~i---l~~~i~~~~~~~vVIDSIQtl~~~~~~s~~GsvsQvr  195 (479)
T Consensus       255 kirtg~l~~~d~~~l~~a~~~l~~~~i~IdD~~~~si~eir~~aRrlk~~~~l~liviDYLQLm~~~~~~--~~R~qevs  332 (435)
T COG0305         255 KLRTGRLSDDEWERLIKAASELSEAPIFIDDTPGLTITEIRSKARRLKLKHNLGLIVIDYLQLMTGGKKS--ENRKQEVS  332 (435)
T ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHCCEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCC--CHHHHHHH
T ss_conf             0212542689999999999987617854337888878889999998887459738998865411367764--12688999


Q ss_pred             HHHHHHHHHHHHCCCEEEEEEEECCCC-----------CCCCHHHHHHHHHEEEEEECCCCCCC----CCCEEEEEEEEC
Q ss_conf             999999997530797899986303665-----------43311457877530278515556665----442156763202
Q gi|254780334|r  196 TSVQAMIQYAKKNGVAMVLVGHVTKEG-----------QIAGPRVIEHMVDAVLYFEGGTRNTQ----YDYRILRSVKNR  260 (479)
Q Consensus       196 e~~~~L~~~AK~~~i~vilighvTK~G-----------~iAGp~~LeH~VD~vl~~ege~~~~~----~~~R~Lr~~KNR  260 (479)
T Consensus       333 eISr~LK~LAkEL~vPvIAlSQLsR~~E~R~dkrP~lSDLRESGsIEQDADiVmflyRde~y~~~~~~~g~aeiIi~K~R  412 (435)
T COG0305         333 EISRSLKGLAKELGVPVIALSQLNRSVEQRTDKRPMLSDLRESGALEQDADIVIFLHRDEAYLKDTPDRGEAEVIVAKNR  412 (435)
T ss_pred             HHHHHHHHHHHHHCCCEEEHHHHCCCHHHCCCCCCCCCCCCCCCCHHHHCCEEEEEECHHHCCCCCCCCCEEEEEEEECC
T ss_conf             99999999998748808864452441121145687555675578436657789998142322677788862899987436


Q ss_pred             CCCCCCEEE
Q ss_conf             567651279
Q gi|254780334|r  261 FGPTDEIGV  269 (479)
Q Consensus       261 fG~t~e~gv  269 (479)
T Consensus       413 nGp~GtV~l  421 (435)
T COG0305         413 NGPTGTVKL  421 (435)
T ss_pred             CCCCCEEEE
T ss_conf             898745999