HHsearch alignment for GI: 254780334 and conserved domain: COG0444
>COG0444 DppD ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism].
Probab=97.11 E-value=0.018 Score=37.56 Aligned_cols=136 Identities=21% Similarity=0.347 Sum_probs=76.0
Q ss_pred CCCCCCEEEEECCCCCCHHHHHHHHHHHHHC-----CCCCEEEEECCC----CHHHH-HHHHHHCCCCCCC-HHEE----
Q ss_conf 8578708999549875188999999999850-----398199998646----30478-8887520157751-0000----
Q gi|254780334|r 86 GFVRGSVILVGGDPGIGKSTLLMQTAASLAY-----KKHRITYVSGEE----AIGQI-RLRAQRLNTINSS-VYIA---- 150 (479)
Q Consensus 86 Gl~~Gs~~Li~G~PGvGKSTL~Lqia~~~a~-----~g~~vlYvS~EE----s~~Qi-~~Ra~Rl~~~~~~-i~~~---- 150 (479)
T Consensus 27 ~i~~GE~lgiVGESGsGKS~~~~aim~llp~~~~~i~~G~i~f-~g~~l~~l~~~~~~~iRG~~I~mIfQ~p~~sLnPv~ 105 (316)
T COG0444 27 ELKKGEILGIVGESGSGKSVLAKAIMGLLPKPNARIVGGEILF-DGKDLLSLSEKELRKIRGKEIAMIFQDPMTSLNPVM 105 (316)
T ss_pred EECCCCEEEEECCCCCCHHHHHHHHHHCCCCCCCEEEEEEEEE-CCCCCCCCCHHHHHHHCCCEEEEEECCCHHHCCCHH
T ss_conf 8758968999838978899999999846688897486118998-896466699999986317568999748156449703
Q ss_pred ------------------------------C--------------CCC-----HHH-HHHHHHHCCCCCEEEECHHHHHH
Q ss_conf ------------------------------3--------------478-----899-99999731698289972168766
Q gi|254780334|r 151 ------------------------------I--------------ETN-----VED-IIATLITNEKPDLVIIDSIQTLW 180 (479)
Q Consensus 151 ------------------------------~--------------e~~-----l~~-il~~~i~~~~~~~vVIDSIQtl~ 180 (479)
T Consensus 106 ~Ig~Qi~E~l~~h~~~~~~~ea~~~a~~~L~~Vgi~~~~~~~~~YPhelSGGMrQRV~IAm-al~~~P~LlIADEPTTAL 184 (316)
T COG0444 106 TIGDQIAEVLRLHGKGLSKKEAKERAIELLELVGIPDPERRLKSYPHELSGGMRQRVMIAM-ALALNPKLLIADEPTTAL 184 (316)
T ss_pred HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCHHHHHHHHH-HHHCCCCEEEECCCCCHH
T ss_conf 4999999999985141136899999999999769998789986198355871899999999-985899889967986045
Q ss_pred HHHHCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCHHHHHHHHHEEEEE
Q ss_conf 542044556367999999999997530797899986303665433114578775302785
Q gi|254780334|r 181 SQTAESSPGTVIQVRTSVQAMIQYAKKNGVAMVLVGHVTKEGQIAGPRVIEHMVDAVLYF 240 (479)
Q Consensus 181 ~~~~~s~~GsvsQvre~~~~L~~~AK~~~i~vilighvTK~G~iAGp~~LeH~VD~vl~~ 240 (479)
T Consensus 185 Dvt--------vQ-aqIl~ll~~l~~e~~~siilITH--------Dl~vva~~aDrv~VM 227 (316)
T COG0444 185 DVT--------VQ-AQILDLLKELQREKGTALILITH--------DLGVVAEIADRVAVM 227 (316)
T ss_pred HHH--------HH-HHHHHHHHHHHHHCCCEEEEEEC--------CHHHHHHHCCEEEEE
T ss_conf 199--------99-99999999999854978999948--------889999745668998