HHsearch alignment for GI: 254780334 and conserved domain: COG1123
>COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only].
Probab=97.88 E-value=0.00045 Score=49.29 Aligned_cols=122 Identities=20% Similarity=0.256 Sum_probs=71.1
Q ss_pred CCCCCCEEEEECCCCCCHHHHHHHHHHHHHCC----CCCEEEEECCC---CHH-HHHHHHHH------------------
Q ss_conf 85787089995498751889999999998503----98199998646---304-78888752------------------
Q gi|254780334|r 86 GFVRGSVILVGGDPGIGKSTLLMQTAASLAYK----KHRITYVSGEE---AIG-QIRLRAQR------------------ 139 (479)
Q Consensus 86 Gl~~Gs~~Li~G~PGvGKSTL~Lqia~~~a~~----g~~vlYvS~EE---s~~-Qi~~Ra~R------------------ 139 (479)
T Consensus 31 ~v~~GE~lgIvGESGsGKSt~a~~i~gll~~~~~~~~G~I~~~g~dl~~l~~~~~r~~rg~~Ia~i~Q~p~~slnP~~tI 110 (539)
T COG1123 31 EVEPGEILGIVGESGSGKSTLALALMGLLPEGGRITSGEVILDGRDLLGLSEREMRKLRGKRIAMIFQDPMTSLNPVMTI 110 (539)
T ss_pred EECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCCCCEEEEECCCCHHCCCHHHHHHHCCCCEEEEECCCHHHCCCHHHH
T ss_conf 86489589998689888899999985548887864441899878023217877898741640899966863554963139
Q ss_pred -----------------------------CCCCCCCHHEECCCCHH------HHHHHHHHCCCCCEEEECHHHHHHHHHH
Q ss_conf -----------------------------01577510000347889------9999997316982899721687665420
Q gi|254780334|r 140 -----------------------------LNTINSSVYIAIETNVE------DIIATLITNEKPDLVIIDSIQTLWSQTA 184 (479)
Q Consensus 140 -----------------------------l~~~~~~i~~~~e~~l~------~il~~~i~~~~~~~vVIDSIQtl~~~~~ 184 (479)
T Consensus 111 g~Qi~E~~~~h~~~~~~ea~~~a~elL~~Vgl~~~~~~~~yPheLSGG~rQRv~iAmAL-a~~P~LLIaDEPTTaLDvt~ 189 (539)
T COG1123 111 GDQIREALRLHGKGSRAEARKRAVELLEQVGLPDPERRDRYPHQLSGGMRQRVMIAMAL-ALKPKLLIADEPTTALDVTT 189 (539)
T ss_pred HHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCHHHHHHHHHHHH-HCCCCEEEECCCCCCCCHHH
T ss_conf 99999999973565599999999999997299982554248722670499999999998-37999899779854108999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEE
Q ss_conf 445563679999999999975307978999863
Q gi|254780334|r 185 ESSPGTVIQVRTSVQAMIQYAKKNGVAMVLVGH 217 (479)
Q Consensus 185 ~s~~GsvsQvre~~~~L~~~AK~~~i~viligh 217 (479)
T Consensus 190 ---------q~qIL~llk~l~~e~g~a~l~ITH 213 (539)
T COG1123 190 ---------QAQILDLLKDLQRELGMAVLFITH 213 (539)
T ss_pred ---------HHHHHHHHHHHHHHCCCEEEEECC
T ss_conf ---------999999999999970948999868