HHsearch alignment for GI: 254780334 and conserved domain: COG1131
>COG1131 CcmA ABC-type multidrug transport system, ATPase component [Defense mechanisms].
Probab=97.70 E-value=0.00056 Score=48.55 Aligned_cols=144 Identities=24% Similarity=0.290 Sum_probs=78.7
Q ss_pred HHHHHHCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCH---HHHHHH------------------
Q ss_conf 48888659857870899954987518899999999985039819999864630---478888------------------
Q gi|254780334|r 78 ELDRVTGGGFVRGSVILVGGDPGIGKSTLLMQTAASLAYKKHRITYVSGEEAI---GQIRLR------------------ 136 (479)
Q Consensus 78 eLDrvLGGGl~~Gs~~Li~G~PGvGKSTL~Lqia~~~a~~g~~vlYvS~EEs~---~Qi~~R------------------ 136 (479)
T Consensus 20 ~l~~v-s~~i~~Gei~gllG~NGAGKTTllk~l~Gl~~p~~G~i-~i~G~~~~~~~~~~~~~igy~~~~~~~~~~lTv~e 97 (293)
T COG1131 20 ALDGV-SFEVEPGEIFGLLGPNGAGKTTLLKILAGLLKPTSGEI-LVLGYDVVKEPAKVRRRIGYVPQEPSLYPELTVRE 97 (293)
T ss_pred EEEEE-EEEEECCEEEEEECCCCCCHHHHHHHHHCCCCCCCEEE-EECCCCCCCCHHHHHCEEEEEECCCCCCCCCCHHH
T ss_conf 88604-99982895999989999989999999967977886499-99586275126765052999947877771475999
Q ss_pred -----------------------HHHCCCCCCCHHEECCCCHHH----HHHHHHHCCCCCEEEECHHHHHHHHHHCCCCC
Q ss_conf -----------------------752015775100003478899----99999731698289972168766542044556
Q gi|254780334|r 137 -----------------------AQRLNTINSSVYIAIETNVED----IIATLITNEKPDLVIIDSIQTLWSQTAESSPG 189 (479)
Q Consensus 137 -----------------------a~Rl~~~~~~i~~~~e~~l~~----il~~~i~~~~~~~vVIDSIQtl~~~~~~s~~G 189 (479)
T Consensus 98 ~l~~~~~l~~~~~~~~~~~~~~~l~~~~L~~~~~~~~~~lS~G~kqrl~ia~a-L~~~P~lliLDEPt----~GLDp--- 169 (293)
T COG1131 98 NLEFFARLYGLSKEEAEERIEELLELFGLEDKANKKVRTLSGGMKQRLSIALA-LLHDPELLILDEPT----SGLDP--- 169 (293)
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHCCCHHHCCHHHHHHHHHHHH-HHCCCCEEEEECCC----CCCCH---
T ss_conf 99999998499716679999999998699603288102379889999999999-96699999996997----78799---
Q ss_pred CHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCHHHHHHHHHEEEEEE
Q ss_conf 3679999999999975307978999863036654331145787753027851
Q gi|254780334|r 190 TVIQVRTSVQAMIQYAKKNGVAMVLVGHVTKEGQIAGPRVIEHMVDAVLYFE 241 (479)
Q Consensus 190 svsQvre~~~~L~~~AK~~~i~vilighvTK~G~iAGp~~LeH~VD~vl~~e 241 (479)
T Consensus 170 --~~~~~~~~~l~~l~~~g~~tvlissH~l~e--------~~~~~d~v~il~ 211 (293)
T COG1131 170 --ESRREIWELLRELAKEGGVTILLSTHILEE--------AEELCDRVIILN 211 (293)
T ss_pred --HHHHHHHHHHHHHHHCCCCEEEEECCCHHH--------HHHHCCEEEEEE
T ss_conf --999999999999996799599998388699--------998689999998